DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcnk6

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001028697.2 Gene:Kcnk6 / 52150 MGIID:1891291 Length:313 Species:Mus musculus


Alignment Length:300 Identity:61/300 - (20%)
Similarity:98/300 - (32%) Gaps:86/300 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 NGTKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITL 327
            :|.....|...|.....|...||        :|.........|.......:::..:..:|..:.|
Mouse    81 SGAANASDPAWDFASALFFASTL--------VTTVGYGYTTPLTDAGKAFSIVFALLGVPITMLL 137

  Fly   328 ATVVAEEEDTLNLPKAPVS--------PQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQI 384
            .|..|:....| |..||:|        |..:::...: :|:|.||                    
Mouse   138 LTASAQRLSLL-LTHAPLSWLSLHWGWPPQRAARWHL-VALLMVI-------------------- 180

  Fly   385 LGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMT 449
                         :.||||....|.    .|..||.       |..|||::..::::|:|.||..
Mouse   181 -------------VAIFFLVPAAVF----AYLEEAW-------SFLDAFYFCFISLSTIGLGDYV 221

  Fly   450 PVGVWGKIVGSL--CAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLPGTL 512
            |....|:...:|  ..:...|.:.|...|:|..   .:.|.:|        .:.:|....||.. 
Mouse   222 PGEAPGQPYRALYKVLVTAYLFLGLVAMVLVLQ---TFRRVSD--------LHGLTELILLPDP- 274

  Fly   513 GQHMKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAVA 552
                ..:|||:      |.||.|......|:.|...||.:
Mouse   275 ----DPASLSQ------DEDDQVAVLDARTDLHQHLSAAS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 45/234 (19%)
Kcnk6NP_001028697.2 Ion_trans_2 <89..146 CDD:462301 10/64 (16%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 106..111 0/4 (0%)
Ion_trans_2 180..259 CDD:462301 24/125 (19%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:P57789 214..219 2/4 (50%)
Lysosomal targeting signal. /evidence=ECO:0000250|UniProtKB:G3V8R8 282..290 4/7 (57%)
Lysosomal targeting signal. /evidence=ECO:0000250|UniProtKB:G3V8R8 308..312
Blue background indicates that the domain is not in the aligned region.

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