DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and KCNS2

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_065748.1 Gene:KCNS2 / 3788 HGNCID:6301 Length:477 Species:Homo sapiens


Alignment Length:514 Identity:156/514 - (30%)
Similarity:251/514 - (48%) Gaps:137/514 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 INVSGLRFETQLRTLNQFPDTLLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAI 152
            |||.|.:...:..||.:||:|.||    ||..             :|.::.|::|||:...|..:
Human    21 INVGGFKRRLRSHTLLRFPETRLG----RLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYV 81

  Fly   153 LYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDE--GFIKEEERPLPDNEK------ 209
            |::|.: |:|.....:.:..||:||:::     .||:|..|.  .:.....:..|:.||      
Human    82 LHFYHT-GKLHVMAELCVFSFSQEIEYW-----GINEFFIDSCCSYSYHGRKVEPEQEKWDEQSD 140

  Fly   210 -----------------------------QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFC 245
                                         :|::||..:.|..|..:||.:|:|:.|::.||:..|
Human   141 QESTTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSILSILVVMGSIITMC 205

  Fly   246 LETLPEFKHYKVFNTTTNGTKIEEDEVPDI-----TDP-FFLIETLCIIWFTFELTVRFLACPNK 304
            |.:||:|                  ::||.     .|| |.::|...|.||||||..||...|:.
Human   206 LNSLPDF------------------QIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDF 252

  Fly   305 LNFCRDVMNVIDIIAIIPYFITL-ATVVAEEEDTL-NLPKAPVSPQDKSSNQAMSLAILRVIRLV 367
            |.|.::.:|:||:::|:|::||| ..:|.|...|| ||.:                 :.:|:||:
Human   253 LKFFKNALNLIDLMSIVPFYITLVVNLVVESTPTLANLGR-----------------VAQVLRLM 300

  Fly   368 RVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDA 432
            |:|||.||:|||.||:.||.|||.|.:|:|||:.:|.:|:.:||...|..|. .||....:||..
Human   301 RIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVVAYTIEK-EENEGLATIPAC 364

  Fly   433 FWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQ 497
            :|||.|:||||||||:.|....||:..|.|.:||:|.:.||:.:|.:.|::||.|   |::::|.
Human   365 WWWATVSMTTVGYGDVVPGTTAGKLTASACILAGILVVVLPITLIFNKFSHFYRR---QKQLESA 426

  Fly   498 NFNHVTSCPYLPGTLGQHMKK---------------------SSLSESSSDMMDLDDGV 535
                :.||.:     |..||:                     :::|.||...:.|:|.:
Human   427 ----MRSCDF-----GDGMKEVPSVNLRDYYAHKVKSLMASLTNMSRSSPSELSLNDSL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 38/171 (22%)
Ion_trans 226..488 CDD:459842 104/269 (39%)
KCNS2NP_065748.1 BTB_POZ_KCNS2 18..124 CDD:349734 31/112 (28%)
Ion_trans 186..421 CDD:459842 105/273 (38%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 4/4 (100%)

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