DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and KCNG1

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_002228.2 Gene:KCNG1 / 3755 HGNCID:6248 Length:513 Species:Homo sapiens


Alignment Length:529 Identity:156/529 - (29%)
Similarity:244/529 - (46%) Gaps:99/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QRNSLDG--YGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTL 115
            ||.::.|  |....:|..|||.          .|..:|    .|...|::|||.|:::.....||
Human    31 QRQAIKGAFYRRAQRLRPQDEP----------RQGCQP----EDRRRRIIINVGGIKYSLPWTTL 81

  Fly   116 NQFPDTLLGDPARRLRYFDPLR---------NEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLD 171
            ::||.|.||.......:.|.|.         ||:||||:..:|..||.:.:: |:||....:...
Human    82 DEFPLTRLGQLKACTNFDDILNVCDDYDVTCNEFFFDRNPGAFGTILTFLRA-GKLRLLREMCAL 145

  Fly   172 VFSEEIKFYELGD------------QAINKFREDEGFIKEEERPLPDNEKQ-------------- 210
            .|.||:.::.:.:            |.|.:|.  |...:|||....|:|.:              
Human   146 SFQEELLYWGIAEDHLDGCCKRRYLQKIEEFA--EMVEREEEDDALDSEGRDSEGPAEGEGRLGR 208

  Fly   211 --RKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVP 273
              |::..:.|.|.|....:|.|.:||..:.::.|...:.|||..:..:           |:....
Human   209 CMRRLRDMVERPHSGLPGKVFACLSVLFVTVTAVNLSVSTLPSLREEE-----------EQGHCS 262

  Fly   274 DITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTL 338
            .:....|::|::|:.||:.|..:|.:..|:|..|.|..:.:||::||:||:|||  :|.......
Human   263 QMCHNVFIVESVCVGWFSLEFLLRLIQAPSKFAFLRSPLTLIDLVAILPYYITL--LVDGAAAGR 325

  Fly   339 NLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFL 403
            ..|.|..|..||..      .:|||:|.:|:..:.:|:|||.|||.||.|.:...||.|||:.||
Human   326 RKPGAGNSYLDKVG------LVLRVLRALRILYVMRLARHSLGLQTLGLTARRCTREFGLLLLFL 384

  Fly   404 FIGVVLFSSAVYFAE-AGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGV 467
            .:.:.||:..:|..| ..:::..|.|||..:||||:||||||||||.|....|::|.....::|:
Human   385 CVAIALFAPLLYVIENEMADSPEFTSIPACYWWAVITMTTVGYGDMVPRSTPGQVVALSSILSGI 449

  Fly   468 LTIALPVPVIVSNFNYFY-HRETDQEEMQSQNFNHVTSCPYLPGTLGQHMKKSSLSES------- 524
            |.:|.||..|...|:..| ..:.:||.:..:.      ..:|..|      ||.||.|       
Human   450 LLMAFPVTSIFHTFSRSYLELKQEQERVMFRR------AQFLIKT------KSQLSVSQDSDILF 502

  Fly   525 ---SSDMMD 530
               |||..|
Human   503 GSASSDTRD 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 41/162 (25%)
Ion_trans 226..488 CDD:459842 90/263 (34%)
KCNG1NP_002228.2 BTB_POZ_KCNG1_2 60..173 CDD:349728 31/113 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..204 4/19 (21%)
Ion_trans 227..471 CDD:459842 90/262 (34%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)

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