DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcng2

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001100842.1 Gene:Kcng2 / 307234 RGDID:1309521 Length:480 Species:Rattus norvegicus


Alignment Length:527 Identity:146/527 - (27%)
Similarity:235/527 - (44%) Gaps:97/527 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LDGYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDT 121
            |.|:..:|.........|...|.|...:|             |:|||.|.|.......|.:.|..
  Rat     4 LPGHPEVPGAEPGSAVRGGRGGRGARARH-------------VIINVGGCRVRLAWAALARCPLA 55

  Fly   122 LLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAILYYYQSG--GRLRRPVNVPLD 171
            .|    .|||.             :|..|:|:|||||..:|.||:...::|  ..||.|..:   
  Rat    56 RL----ERLRACRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCAL--- 113

  Fly   172 VFSEEIKFYELGDQAINKF-------REDEGFIKEEERPLPD-----------------NEKQRK 212
            .|.:|:.::.:.:..:.:.       ||:|.   .|.|..|.                 ...:|:
  Rat   114 AFRDELAYWGIDEARLERCCLRRLRRREEEA---AEARATPPARGPQTSPGRALGSGRLERGRRR 175

  Fly   213 VWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITD 277
            :..:.|.|.|..|.::.|.:||..:.::.|..||.|:|:.:           .:.|..|......
  Rat   176 LRDVVENPHSGLAGKLFAYVSVAFVAVTAVGLCLSTMPDVR-----------AEEERGECSTKCR 229

  Fly   278 PFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPK 342
            ..|::||:|:.||:||..:|.|...:|..|.|..:.:|||:||:|::::|...:|          
  Rat   230 NLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLAIIDILAILPFYVSLLAGLA---------- 284

  Fly   343 APVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGV 407
              ..|......:...| :||::|.:||..:.:|:|||.||:.||.|::...||.|||:.||.:.:
  Rat   285 --AGPTGSKMLERAGL-VLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAM 346

  Fly   408 VLFSSAVYFA--EAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTI 470
            .||:..|:.|  |.|:... |.|:|.::||||::|||||||||.|..:.|::|.....::|:|.:
  Rat   347 ALFAPLVHLAERELGAHRD-FSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLM 410

  Fly   471 ALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYL--PGTLGQHMKKSSLSESSSDMMDLDD 533
            |.||..|...|:..|      .|::.|.....:..|.|  ..|.....:.:|.:|.||...:...
  Rat   411 AFPVTSIFHTFSRSY------SELKEQQQRAASPEPVLREDSTRDDSTRSASATEDSSQDPETAG 469

  Fly   534 GVESTPG 540
            ...|.||
  Rat   470 AAGSLPG 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 38/164 (23%)
Ion_trans 226..488 CDD:459842 87/263 (33%)
Kcng2NP_001100842.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 4/20 (20%)
BTB_POZ_Kv6_KCNG 33..127 CDD:349691 29/100 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..167 3/25 (12%)
Ion_trans 190..429 CDD:459842 88/269 (33%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 382..387 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..480 11/48 (23%)

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