DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and KCNG2

DIOPT Version :9

Sequence 1:NP_001303569.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_016881193.1 Gene:KCNG2 / 26251 HGNCID:6249 Length:509 Species:Homo sapiens


Alignment Length:506 Identity:139/506 - (27%)
Similarity:231/506 - (45%) Gaps:108/506 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 GFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRY---------- 132
            |.|||.:           ...|:|||.|.|.......|.:.|...|    .|||.          
Human    52 GGGGGTR-----------ARHVIINVGGCRVRLAWAALARCPLARL----ERLRACRGHDDLLRV 101

  Fly   133 ---FDPLRNEYFFDRSRPSFDAILYYYQSG--GRLRRPVNVPLDVFSEEIKFYELGDQAINKF-- 190
               :|..|:|:|||||..:|.||:...::|  ..||.|..:   .|.:|:.::.:.:..:.:.  
Human   102 CDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCAL---AFRDELAYWGIDEARLERCCL 163

  Fly   191 -----REDEGFIKEEERPLPD------------------NEKQRKVWLLFEYPESSQAARVVAII 232
                 ||:|.   .|.|..|.                  ...:|::..:.:.|.|..|.::.|.:
Human   164 RRLRRREEEA---AEARAGPTERGAQGSPARALGPRGRLQRGRRRLRDVVDNPHSGLAGKLFACV 225

  Fly   233 SVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDITDPFFLIETLCIIWFTFELTVR 297
            ||..:.::.|..||.|:|:.:           .:.|..|........|::||:|:.||:||..:|
Human   226 SVSFVAVTAVGLCLSTMPDIR-----------AEEERGECSPKCRSLFVLETVCVAWFSFEFLLR 279

  Fly   298 FLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLA--I 360
            .|...:|..|.|..:|:|||:|::|::::|         .|.|...|      ...:.:..|  :
Human   280 SLQAESKCAFLRAPLNIIDILALLPFYVSL---------LLGLAAGP------GGTKLLERAGLV 329

  Fly   361 LRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAE----AGS 421
            ||::|.:||..:.:|:|||.||:.||.|::...||.|||:.||.:.:.||:..|:.||    |..
Human   330 LRLLRALRVLYVMRLARHSLGLRSLGLTMRRCAREFGLLLLFLCVAMALFAPLVHLAERELGARR 394

  Fly   422 DSSFFKSIPDGFWWAVVTMTTVGYGDMRPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYH 486
            |   |.|:|..:||||::|||||||||.|..:.|::|.....::|:|.:|.||..|...|:..|.
Human   395 D---FSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYS 456

  Fly   487 RETDQEE--------MQSQNFNHVTSCPYLPGTLGQHMKKSSLSESSSDMM 529
            ...:|::        :|..:.:..|:..    ...|....:.|::.|:|.:
Human   457 ELKEQQQRAASPEPALQEDSTHSATATE----DSSQGPDSAGLADDSADAL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_001303569.1 BTB_2 99..187 CDD:280393 29/102 (28%)
BTB 99..182 CDD:197585 29/97 (30%)
Ion_trans 274..488 CDD:278921 79/219 (36%)
Ion_trans_2 403..479 CDD:285168 33/79 (42%)
KCNG2XP_016881193.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000074
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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