DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcna10

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001074609.1 Gene:Kcna10 / 242151 MGIID:3037820 Length:511 Species:Mus musculus


Alignment Length:444 Identity:277/444 - (62%)
Similarity:339/444 - (76%) Gaps:33/444 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 ERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGR 161
            :||:||::|||||||||||||||:|||||..:|:::||.:||||||||:|||||.|||||||||:
Mouse    86 QRVIINIAGLRFETQLRTLNQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGK 150

  Fly   162 LRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAA 226
            :|||.|||:|||::||.|||||.:|:::|||||||||:.|..||.|:..|:.||||||||||.||
Mouse   151 IRRPANVPIDVFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDFHRQFWLLFEYPESSSAA 215

  Fly   227 RVVAIISVFVILLSIVIFCLETLPEF---KHYKVF---NTTTNGTKIEEDEVPDITDPFFLIETL 285
            |.||::||.|:::||.||||||||||   :..||.   :..||.|.:.:..   .|||||::|:.
Mouse   216 RGVAVVSVLVVVISITIFCLETLPEFREDRELKVVRDPSINTNKTGLSQTM---FTDPFFMVEST 277

  Fly   286 CIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDK 350
            ||:||||||.:||:.||:|.:|.:::||:||||:|||||.||.|.:.:|             .:.
Mouse   278 CIVWFTFELVLRFVVCPSKTDFFKNIMNIIDIISIIPYFATLITELVQE-------------TEP 329

  Fly   351 SSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVY 415
            |:.|.|||||||:|||||||||||||||||||||||:||||||||||||||||||||:|||||||
Mouse   330 SAQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVY 394

  Fly   416 FAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSN 480
            |||.....|.|.||||.||||||||||||||||.|....|||||:||||||||||||||||||||
Mouse   395 FAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALPVPVIVSN 459

  Fly   481 FNYFYHRETDQEEMQSQNFNHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLDDG 534
            |||||||||:.||.           |.:||.|.:.:........|::.::..:|
Mouse   460 FNYFYHRETENEEK-----------PNIPGELDKILNSMGSRMGSTESLNKTNG 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 88/125 (70%)
Ion_trans 226..488 CDD:459842 175/267 (66%)
Kcna10NP_001074609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..44
BTB_POZ 86..212 CDD:453885 88/125 (70%)
Ion_trans 262..467 CDD:459842 151/220 (69%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 421..426 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..511 2/14 (14%)
Blue background indicates that the domain is not in the aligned region.

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