DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcng3

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_705732.1 Gene:Kcng3 / 225030 MGIID:2663923 Length:433 Species:Mus musculus


Alignment Length:443 Identity:146/443 - (32%)
Similarity:228/443 - (51%) Gaps:54/443 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VVINVSGLRFETQLRTLNQFP----DTLLGDPARR-----LRYFDPLRNEYFFDRSRPSFDAILY 154
            ||:||.|.|:......|..||    ..|.|..:.|     ...:|..||||||||...:|..||.
Mouse    11 VVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFGFILL 75

  Fly   155 YYQSGGRLR-RPVNVPLDVFSEEIKF------------YELGDQA--INKFREDEGFIKEEERPL 204
            |.:..|:|| .|....|..::|.|.:            ..|.|:.  .:.|...:...:|:.||.
Mouse    76 YVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTHTFHAADELGREQPRPA 140

  Fly   205 PDNEKQRKVWL-----LFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNG 264
            .......:.||     .||.|.||.||:::|.:||..:::|:|:.|..|||:::.....|.:.: 
Mouse   141 GPEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTLPDWRAAVADNRSLD- 204

  Fly   265 TKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLAT 329
            .:......|. .:|..:||.:||.|||.|..|||:...||..|.:..:|:||::||.||:|::..
Mouse   205 DRSRYSASPG-REPSGIIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVLM 268

  Fly   330 VVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMR 394
            .|...|:: .|.:|.|:              |||:|::|:|.:.||:||..|||.||.|||...|
Mouse   269 TVFTGENS-QLQRAGVT--------------LRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYR 318

  Fly   395 ELGLLIFFLFIGVVLFSSAVYFAEAG----SENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWG 455
            |:.:|:.|:.:.:.:||:.....|.|    :.|..|.|||.|.||.:::|||||||||.|:.|.|
Mouse   319 EMAMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFASIPAACWWVIISMTTVGYGDMYPITVPG 383

  Fly   456 KIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYL 508
            :|:|.:|.::|::.:|||:..|..:|...||    :.:.:|..::...|..:|
Mouse   384 RILGGVCVVSGIVLLALPITFIYHSFVQCYH----ELKFRSARYSRSLSAEFL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 43/152 (28%)
Ion_trans 226..488 CDD:459842 97/265 (37%)
Kcng3NP_705732.1 BTB_POZ_KCNG3 11..122 CDD:349729 34/110 (31%)
Ion_trans 210..417 CDD:459842 86/226 (38%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 4/4 (100%)

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