DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and Kcnk5

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_067517.1 Gene:Kcnk5 / 16529 MGIID:1336175 Length:502 Species:Mus musculus


Alignment Length:259 Identity:57/259 - (22%)
Similarity:92/259 - (35%) Gaps:83/259 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 FKLSRHS-KGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWA 436
            |:.|.|| |.||:.|.|....:.      .|.|:.          .:..:.|...|.|      .
Mouse   267 FESSPHSRKALQMAGSTASKDVN------IFSFLS----------KKEETYNDLIKQI------G 309

  Fly   437 VVTMTTVGYGDMTP-----VGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQS 496
            ...|.|.|.|:..|     :|..|..:.::.|     ::|   |::|    |..:|....||:..
Mouse   310 KKAMKTSGGGERVPGPGHGLGPQGDRLPTIPA-----SLA---PLVV----YSKNRVPSLEEVSQ 362

  Fly   497 --QNFNHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLD---------DGVESTP----------- 539
              :|..|| |.| |....|....|.|...|...:..||         :.::..|           
Mouse   363 TLKNKGHV-SRP-LGEEAGAQAPKDSYQTSEVFINQLDRISEEGEPWEALDYHPLIFQNANITFE 425

  Fly   540 ----GLTETHPGRSAVAPFLGAQQQQQQ------PVAS---------SLSMSIDKQLQHPLQQL 584
                ||::....:|:|...|.:::|.:|      |::|         |...|.:.:|..|.:||
Mouse   426 NEETGLSDEETSKSSVEDNLTSKEQPEQGPMAEAPLSSTGEFPSSDESTFTSTESELSVPYEQL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 26/120 (22%)
Kcnk5NP_067517.1 Ion_trans_2 <83..137 CDD:462301
Ion_trans_2 171..243 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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