DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and LOC1277771

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_061512001.1 Gene:LOC1277771 / 1277771 VectorBaseID:AGAMI1_002465 Length:622 Species:Anopheles gambiae


Alignment Length:620 Identity:200/620 - (32%)
Similarity:287/620 - (46%) Gaps:112/620 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRL 162
            |||:||.|:|.||...||.:.|.|.|......|..:||:.|||||||....|..:|.||:: |:|
Mosquito     9 RVVLNVGGIRHETYKATLKKIPATRLSRLTEALANYDPILNEYFFDRHPGVFAQVLNYYRT-GKL 72

  Fly   163 RRPVNVPLDVFSEEIKFYELGDQAI--------NKFREDEGFIKEEERPLPDNEK---------- 209
            ..|.:|...:|.||::|:.|....:        .:.|:.:..:...||...|.||          
Mosquito    73 HYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTQHRDTQETLAVLERLDLDTEKPTEEELARKF 137

  Fly   210 -----------------QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKV 257
                             :.::|.||:.|.||.||:::.:||||.|.:||:.|||:|.|:.:...:
Mosquito   138 GYEDDYLKGTVSWWQHMKPQMWSLFDEPYSSNAAKIIGVISVFFICVSILSFCLKTHPDMRVPVI 202

  Fly   258 FNTTTNGTKIEEDEVPDITD-----PFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDI 317
            .|.|..........|.|.|.     .||.||.:|..|||||:.|||::.|||..|....:|:||.
Mosquito   203 RNITVKTANGSTAWVLDKTQTNAHVAFFYIECVCNAWFTFEILVRFISSPNKCEFVTSSVNIIDY 267

  Fly   318 IAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGL 382
            ||.:.:::.|..                   .:.::...:..||....::|:.|:|||:|||.||
Mosquito   268 IATLSFYVDLVL-------------------QRFASHLENADILEFFSIIRIMRLFKLTRHSSGL 313

  Fly   383 QILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAE---AGSENSFFKSIPDAFWWAVVTMTTVG 444
            :||.:|.:||.:||.||:|||.:|:|:|:|.||:||   |...|. |.|||...|||:|||||||
Mosquito   314 KILIQTFRASAKELTLLVFFLVLGIVIFASLVYYAERIQANPHND-FNSIPLGLWWALVTMTTVG 377

  Fly   445 YGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFY-HRETDQEEMQSQNFNHVTSCPYL 508
            ||||.|....|..||:|||:|||||||||||||||||..:| |.:...:..:.:........|..
Mosquito   378 YGDMAPKTYIGMFVGALCALAGVLTIALPVPVIVSNFAMYYSHTQARAKLPKKRRRVLPVEQPRQ 442

  Fly   509 PGTLGQ-----------------HMKKSSL-------SESSSDMMDLDDGVESTPGLTETHPGRS 549
            |.|.||                 .:|...|       ..|...|...:.|:.:.|.|....|...
Mosquito   443 PRTAGQGGGIGMPGSGPMARRMNQVKTKDLGPKIGPIGASIVAMCPKNVGLHTNPALAMCKPTFE 507

  Fly   550 AVAPFLGAQQQQQQPVASSLSMSIDKQLQHP-LQQLTQTQLYQQQQQQQQQQQNGFKQQQQQTQQ 613
            ...|.:........|..|:...::.....:. ...||.|.|           .|........|. 
Mosquito   508 VRPPSIVPTPMMLVPRDSTYKPTVTTPTANSGTGGLTITAL-----------ANATSTNNNSTT- 560

  Fly   614 QLQQQQSHTI--NASAAAATSGSGSSGLTMRHNNA 646
                    |:  |.|..:|.|.:|:.|.|:.::|:
Mosquito   561 --------TVNNNNSKNSANSNNGTGGKTIANSNS 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 47/159 (30%)
Ion_trans 226..488 CDD:459842 119/270 (44%)
LOC1277771XP_061512001.1 None

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