DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcnk3

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_031757747.1 Gene:kcnk3 / 116410805 XenbaseID:XB-GENE-956081 Length:378 Species:Xenopus tropicalis


Alignment Length:91 Identity:29/91 - (31%)
Similarity:43/91 - (47%) Gaps:22/91 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   362 RVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFF-----LFIGVVLFSSAVYFAEAGS 421
            |:..|||    :.|.|..|.|.:  |..:.||..:..:.||     |.||...|||.       .
 Frog   131 RINTLVR----YLLHRMKKCLGM--RRAEVSMANMVTIGFFSCISTLCIGAAAFSSY-------E 182

  Fly   422 ENSFFKSIPDAFWWAVVTMTTVGYGD 447
            :.|||    .|:::..:|:||:|:||
 Frog   183 QWSFF----HAYYYCFITLTTIGFGD 204

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 29/91 (32%)