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Protein Alignment Sh and kcnk3
DIOPT Version :10
| Sequence 1: | NP_728123.1 |
Gene: | Sh / 32780 |
FlyBaseID: | FBgn0003380 |
Length: | 655 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_031757747.1 |
Gene: | kcnk3 / 116410805 |
XenbaseID: | XB-GENE-956081 |
Length: | 378 |
Species: | Xenopus tropicalis |
| Alignment Length: | 91 |
Identity: | 29/91 - (31%) |
| Similarity: | 43/91 - (47%) |
Gaps: | 22/91 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 362 RVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFF-----LFIGVVLFSSAVYFAEAGS 421
|:..||| :.|.|..|.|.: |..:.||..:..:.|| |.||...|||. .
Frog 131 RINTLVR----YLLHRMKKCLGM--RRAEVSMANMVTIGFFSCISTLCIGAAAFSSY-------E 182
Fly 422 ENSFFKSIPDAFWWAVVTMTTVGYGD 447
:.||| .|:::..:|:||:|:||
Frog 183 QWSFF----HAYYYCFITLTTIGFGD 204
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Sh | NP_728123.1 |
BTB_POZ |
97..223 |
CDD:453885 |
|
| Ion_trans |
226..488 |
CDD:459842 |
29/91 (32%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.