DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcna10

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_002938481.1 Gene:kcna10 / 100497698 XenbaseID:XB-GENE-991589 Length:499 Species:Xenopus tropicalis


Alignment Length:528 Identity:286/528 - (54%)
Similarity:364/528 - (68%) Gaps:61/528 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EQLEQKEEQKKIAERKLQLREQQLQRNSLDGYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDH 93
            |..|:.|..|.::..|:.:.....|..:....|: ..|:::.|             ||......|
 Frog     9 EHPEETELHKDVSATKVAISSYVNQNLNWKAPGN-ENLNNETE-------------HFRFNSKSH 59

  Fly    94 DFC------------ERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRYFDPLRNEYFFDRSR 146
            | |            :||.||::||||||.|:||::|||||||||.:|:.|||.:||||||||:|
 Frog    60 D-CLFLELMSMEEGDQRVFINIAGLRFETHLKTLSEFPDTLLGDPKKRIHYFDSMRNEYFFDRNR 123

  Fly   147 PSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAINKFREDEGFIKEEERPLPDNEKQR 211
            ||||.|||||||||::|||.|||:|||::||.|||||::|:::||:||||:|:.|.|||.|:..:
 Frog   124 PSFDGILYYYQSGGKIRRPANVPIDVFADEINFYELGNEAMDQFRDDEGFLKDPEIPLPTNDYYK 188

  Fly   212 KVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK-VFNTTTNGTKIEEDEVPD- 274
            :.||||||||||.|||.:|::||.||::||:|||:||||||:..: ::.....|...|....|. 
 Frog   189 QFWLLFEYPESSTAARGMALVSVLVIIISILIFCMETLPEFREERDLYFYRGTGNYSESTTHPST 253

  Fly   275 ITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLATVVAEEEDTLN 339
            .|||||:|||.||.||:|||.|||:.||:...|.|::||:||:::|||||:||.|.:.::.:   
 Frog   254 FTDPFFMIETTCIAWFSFELVVRFVVCPSTSAFFRNIMNIIDLVSIIPYFVTLVTELFKQTE--- 315

  Fly   340 LPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLF 404
                ||..|:      |||||||::||||||||||||||||||||||:|||||||||||||||||
 Frog   316 ----PVGQQN------MSLAILRIVRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLF 370

  Fly   405 IGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLT 469
            |||:||||||||||.....|.|.||||.||||||||||||||||.|:.:.||:||:|||||||||
 Frog   371 IGVILFSSAVYFAEVDEPQSQFLSIPDGFWWAVVTMTTVGYGDMCPITLSGKVVGTLCAIAGVLT 435

  Fly   470 IALPVPVIVSNFNYFYHRETDQEEMQSQNFNHVTSCPYLP--------GTLGQHMKKSSLSESSS 526
            ||||||||||||||||||||:.||..|           ||        |.|.:....|||.:::.
 Frog   436 IALPVPVIVSNFNYFYHRETENEERHS-----------LPVEVEKISLGNLIRAGSSSSLKKNNG 489

  Fly   527 DMMDLDDG 534
            ..:...:|
 Frog   490 SCVSDKNG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 85/125 (68%)
Ion_trans 226..488 CDD:459842 170/263 (65%)
kcna10XP_002938481.1 BTB_POZ 74..200 CDD:453885 85/125 (68%)
Ion_trans 252..454 CDD:459842 149/214 (70%)

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