DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcng2

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_017950308.2 Gene:kcng2 / 100497537 XenbaseID:XB-GENE-954003 Length:489 Species:Xenopus tropicalis


Alignment Length:440 Identity:136/440 - (30%)
Similarity:219/440 - (49%) Gaps:60/440 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DFCERVVINVSGLRFETQLRTLNQFPDTLLGDPARRLRY---------FDPLRNEYFFDRSRPSF 149
            |....|:|||.|:::.....||...|.|.||.......|         :|...||:||||:..:|
 Frog    58 DRTRHVIINVGGIKYRIPWTTLENCPLTRLGKLKTCNNYDEIMDVCDDYDINCNEFFFDRNPCAF 122

  Fly   150 DAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAIN-----------------KFREDEGFI 197
            ..|:.:. :.|:||....:....|.||:.::.:.::.:.                 |..|.|..|
 Frog   123 RTIMTFL-AAGKLRILREMCALSFQEELIYWGIEEEQLEWCCLRKLQQKEEELAEAKMYEGESGI 186

  Fly   198 KEE--ERPLPDNEK----QRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYK 256
            ..|  :..|.|:.:    .:.:..:.|.|.|....::.|.:||..:.::.|..|:.|:|:|:.  
 Frog   187 SNENSQSALQDSGRLAQCMKHLRDMVENPHSGIPGKIFACLSVSFVAITAVSLCISTMPDFRD-- 249

  Fly   257 VFNTTTNGTKIEED--EVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIA 319
                       |||  |........|::||:|:.||:.|..:||:...:|..|.|..:|:|||:|
 Frog   250 -----------EEDRGECSQKCYDIFVLETVCVAWFSLEFVLRFIQAESKCVFLRTPLNMIDIMA 303

  Fly   320 IIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQI 384
            |:||:|||..      |.|:..|...:..:......:   :|||:|.:|:..:.:|:|||.|||.
 Frog   304 ILPYYITLIV------DALSGGKTGGAGNNYLEKVGL---VLRVLRALRILYVMRLARHSLGLQT 359

  Fly   385 LGRTLKASMRELGLLIFFLFIGVVLFSSAVYFA--EAGSENSFFKSIPDAFWWAVVTMTTVGYGD 447
            ||.|::...||.|||:.||.:.:.|||..||.|  |.|::.. |.|||.::||||::||||||||
 Frog   360 LGLTVRRCTREFGLLLLFLCVAMALFSPLVYLAENELGAKQE-FTSIPGSYWWAVISMTTVGYGD 423

  Fly   448 MTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQ 497
            |.|..:.|::|.....::|:|.:|.||..|...|:..|....:|::..|:
 Frog   424 MVPRSIPGQVVALSSILSGILLMAFPVTSIFHTFSRSYTELKEQQQRASR 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 36/157 (23%)
Ion_trans 226..488 CDD:459842 96/265 (36%)
kcng2XP_017950308.2 BTB_POZ_KCNG1_2 58..171 CDD:349728 28/113 (25%)
Ion_trans 222..465 CDD:459842 96/265 (36%)

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