DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and XB5727110

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_031747981.1 Gene:XB5727110 / 100486031 XenbaseID:XB-GENE-5727111 Length:318 Species:Xenopus tropicalis


Alignment Length:87 Identity:21/87 - (24%)
Similarity:41/87 - (47%) Gaps:3/87 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 LRVIRLVRVFRIFKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSF 425
            |.||.|.||.:|.....|..|.....:.:|....::..:|||...|:::|..........:|...
 Frog   132 LNVIVLGRVGKILSRVCHRLGQYFFNKGMKPKKAKVLTIIFFSVTGIIVFLGLPPLLFTKTEKWT 196

  Fly   426 FKSIPDAFWWAVVTMTTVGYGD 447
            :   .:..::|.::::|:|:||
 Frog   197 Y---TEGVYYAFISLSTIGFGD 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885
Ion_trans 226..488 CDD:459842 21/87 (24%)
XB5727110XP_031747981.1 Ion_trans_2 <90..146 CDD:462301 7/13 (54%)
Ion_trans_2 168..245 CDD:462301 11/51 (22%)
Blue background indicates that the domain is not in the aligned region.

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