DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and LOC100330283

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_005174156.1 Gene:LOC100330283 / 100330283 -ID:- Length:515 Species:Danio rerio


Alignment Length:490 Identity:325/490 - (66%)
Similarity:381/490 - (77%) Gaps:47/490 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NSLDGYGSLPKLSSQDEEGGAGHGFGGGPQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFP 119
            |.|:...:||           ||   ...:.:||   ||:.|||||||:|||||||||:||:|||
Zfish    41 NMLEESAALP-----------GH---HSLERYEP---DHECCERVVINISGLRFETQLKTLSQFP 88

  Fly   120 DTLLGDPARRLRYFDPLRNEYFFDRSRPSFDAILYYYQSGGRLRRPVNVPLDVFSEEIKFYELGD 184
            :||||||.:|:||||||||||||||:||||||||||||||||:|||||||:|:|||||:|||||:
Zfish    89 ETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYELGE 153

  Fly   185 QAINKFREDEGFIKEEERPLPDNEKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETL 249
            :|:.|||||||||||||||||.||.||:|||||||||||..||.:||:||.|||:||||||||||
Zfish   154 EAMEKFREDEGFIKEEERPLPTNEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETL 218

  Fly   250 PEFKHYKVFNT---TTNGTKIEEDEVPDIT----DPFFLIETLCIIWFTFELTVRFLACPNKLNF 307
            |||:. .:.:|   ..|||      :|.:|    ||||::||||||||:|||.|||.|||:|..|
Zfish   219 PEFRD-DIDSTVAPVVNGT------IPYLTSPFSDPFFVVETLCIIWFSFELLVRFFACPSKATF 276

  Fly   308 CRDVMNVIDIIAIIPYFITLATVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRI 372
            .:::||:|||:|||||||||.|.:||.:.              :..|||||||||||||||||||
Zfish   277 SKNIMNIIDIVAIIPYFITLGTELAERQG--------------NGQQAMSLAILRVIRLVRVFRI 327

  Fly   373 FKLSRHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAV 437
            ||||||||||||||:||||||||||||||||||||:|||||||||||...:|.|.||||||||||
Zfish   328 FKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADDPDSGFNSIPDAFWWAV 392

  Fly   438 VTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNFNHV 502
            |||||||||||.||.:.|||||||||||||||||||||||||||||||||||:.|| |:| :.|:
Zfish   393 VTMTTVGYGDMHPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEE-QAQ-YLHI 455

  Fly   503 TSCPYLPGTLGQHMKKSSLSESSSDMMDLDDGVES 537
            .|...|..:......:|:.|.|.|:.|.:::|:.|
Zfish   456 GSLQPLSSSGELKKTRSTSSVSKSEYMVIEEGINS 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 106/125 (85%)
Ion_trans 226..488 CDD:459842 189/268 (71%)
LOC100330283XP_005174156.1 BTB_POZ 66..192 CDD:453885 106/125 (85%)
Ion_trans 195..443 CDD:459842 189/268 (71%)

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