DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sh and kcnk6

DIOPT Version :10

Sequence 1:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001120420.1 Gene:kcnk6 / 100145504 XenbaseID:XB-GENE-958681 Length:308 Species:Xenopus tropicalis


Alignment Length:377 Identity:77/377 - (20%)
Similarity:135/377 - (35%) Gaps:109/377 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 KVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTNGTKIEEDEVPDIT 276
            |.|||.        ..:|....::::|.::||..:|:..|..              ..||:..:.
 Frog     2 KFWLLL--------TLLVCAYVIYLLLGALVISVIESPYEAS--------------LRDELRQLK 44

  Fly   277 DPFFLIETLCIIWFTFELTVRFLACPNKL------NFCRDVMNVIDIIAIIPYFITLATVVAEEE 335
            . .||.|:.|:...:.|..:..:...||.      |...|  :..||.:.:.:..||.|.|....
 Frog    45 S-VFLNESPCVNVSSLEAFLEKIINANKYGVSVLHNASND--SKWDIASSMFFASTLVTTVGYGY 106

  Fly   336 DTLNLPKAPVSPQDKS-----------------SNQAMSLAIL---RVIRLVRVFRIFK----LS 376
            .|      |::...|:                 |:....|.::   :.|..::|.|.|.    ..
 Frog   107 TT------PLTDSGKAFCIFYALIGVPFTMLVLSSFVQRLMVMFTHKPIHYLQVQRGFDRKMVTQ 165

  Fly   377 RHSKGLQILGRTLKASMRELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMT 441
            .|...|.||            :|:|||.|...:|::.        |.::  |..|||::..:::.
 Frog   166 LHFFFLLIL------------VLVFFLIIPSAIFNTI--------ETTW--SFLDAFYFCFISLC 208

  Fly   442 TVGYGDMTP---VGVW----GKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQNF 499
            |:|.||..|   ...|    .|:..:.....|::.:.|    ||..|    |:..|        .
 Frog   209 TIGLGDYVPGEQNDQWLRKLYKVSVAFYLFIGLMAMLL----IVQTF----HKAAD--------L 257

  Fly   500 NHVTSCPYLPGTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTETHPGRSAV 551
            :.:|...|||....|..::..|..:.....||:   ...|..:|:.|..|::
 Frog   258 HGLTDIFYLPRLQDQDDQEPILETTDYSTRDLE---PKRPLASESQPDYSSI 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 4/10 (40%)
Ion_trans 226..488 CDD:459842 60/298 (20%)
kcnk6NP_001120420.1 Ion_trans_2 76..141 CDD:462301 12/72 (17%)
Ion_trans_2 <194..251 CDD:462301 15/62 (24%)

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