DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6847 and Lipg

DIOPT Version :9

Sequence 1:NP_001285397.1 Gene:CG6847 / 32778 FlyBaseID:FBgn0030884 Length:1000 Species:Drosophila melanogaster
Sequence 2:NP_001012759.1 Gene:Lipg / 291437 RGDID:1310740 Length:493 Species:Rattus norvegicus


Alignment Length:507 Identity:147/507 - (28%)
Similarity:223/507 - (43%) Gaps:143/507 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 ATTFTTERPGGGQK----KPT---------PSI-------DDLE-----------------GFDE 189
            |.:.||.||.|..:    |||         ||:       .|.|                 ||: 
  Rat    19 AGSLTTLRPQGSLRDEHHKPTGVPVTITTKPSVTFNIRTSKDPEHEGCNLSLGDSKLLENCGFN- 82

  Fly   190 LSVRV--IVHGFG-SACPHVWIYEMKTALMAVE-DCIVICVDWENGATFP----NYVRAAANTRL 246
            ::.:.  |:||:. |.....|::::.:||...| :..|:.|||     .|    .|:.|.:|||:
  Rat    83 MTAKTFFIIHGWTMSGMFESWLHKLVSALQTREKEANVVVVDW-----LPLAHQLYIDAVSNTRV 142

  Fly   247 VGKQLAMLLRNLQQHKGLDLMRTHVIGFSLGAHVSGFAGAELPG-LSRITGLDPAGPLFEAQHPK 310
            ||:::|.:|..||:.....|...|:||:||||||:|:||..:.| :.||||||||||:||.....
  Rat   143 VGRRVAGMLNWLQEKGEFSLGDVHLIGYSLGAHVAGYAGNFVKGTVGRITGLDPAGPMFEGVDIN 207

  Fly   311 VRLDSSDAEFVDVIHSNGENLILG-GLGSWQPMGHVDYYPNGGRVQTGC------SNLFVGAVTD 368
            .||...||:||||:|:  ..|..| .:|...|:||:|.|||||..|.||      .:...|.:::
  Rat   208 RRLSPDDADFVDVLHT--YTLSFGLSIGIRMPVGHIDIYPNGGDFQPGCGFNDVMGSFAYGTISE 270

  Fly   369 FIWSAQAAEDEEGRSLCNHRRAYKFFIDSVA--PRCLFPAFPCGNYDDFLKGRCFPCAQDDEDLA 431
            .:             .|.|.||...|:||:.  .:..| ||.|.:.:.|.:|.|..|.::     
  Rat   271 MV-------------KCEHERAVHLFVDSLVNQDKPSF-AFQCTDPNRFKRGICLSCRKN----- 316

  Fly   432 EGVPRCGNMGYYAD--RSTGRGQLYLLTREEEPFCAHQFQLQI--FNSFN------DLPLRTIGR 486
                ||.|:||.|.  |.....::||.||...||..:.:||::  |:..|      ||.:...| 
  Rat   317 ----RCNNIGYNAKKMRKKRNSKMYLKTRAGMPFRVYHYQLKVHMFSYKNSGDIQPDLYITLYG- 376

  Fly   487 LEAILEGDGGLNETFEISEKDDAEFFAGDIVSKIIVPHPALGFPTTLSLHYKSYSGWLSKGLPHW 551
                              ...|::....:||.||     .|....|..::.:.|.|         
  Rat   377 ------------------SNADSQNLPLEIVEKI-----ELNATNTFLVYTEEYLG--------- 409

  Fly   552 DIDKVVLT------------DSFGRSHSLCRPSTKLSSGSPVRLRLQAGNCE 591
            |:.|:.||            :.| ||: |.:||:........|:|:::|..:
  Rat   410 DLFKIRLTWEGVSSSWYNLWNEF-RSY-LSQPSSPSRELHIRRIRVKSGETQ 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6847NP_001285397.1 Lipase 70..463 CDD:278576 116/357 (32%)
Pancreat_lipase_like 185..459 CDD:238363 103/310 (33%)
LipgNP_001012759.1 Pancreat_lipase_like 51..342 CDD:238363 104/321 (32%)
lipo_lipase 53..488 CDD:132274 136/473 (29%)
Heparin-binding. /evidence=ECO:0000250 327..339 2/11 (18%)
PLAT_LPL 349..485 CDD:238856 29/146 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247005at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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