DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6847 and Lipc

DIOPT Version :9

Sequence 1:NP_001285397.1 Gene:CG6847 / 32778 FlyBaseID:FBgn0030884 Length:1000 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:368 Identity:124/368 - (33%)
Similarity:176/368 - (47%) Gaps:75/368 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 VIVHGF-GSACPHV----------------WIYEMKTALMA--VEDCIVICVDWENGATFPNYVR 239
            :|:||: ||....|                ||:::..||.:  .:...|..|||.:.| :.:|..
  Rat    86 MIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLVDWISLA-YQHYAI 149

  Fly   240 AAANTRLVGKQLAMLLRNLQQHKGLDLMRTHVIGFSLGAHVSGFAGAELPG---LSRITGLDPAG 301
            |..|||:||:::|.||..|::.......:.|:||:|||||||||||:.:.|   :.|||||||||
  Rat   150 AVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSMGGKRKIGRITGLDPAG 214

  Fly   302 PLFEAQHPKVRLDSSDAEFVDVIHS-NGENLILGGLGSWQPMGHVDYYPNGGRVQTGCSNL---- 361
            |:||...|..||...||.|||.||: ..|::.| .:|..||:.|.|:|||||..|.||..|    
  Rat   215 PMFEGTSPNERLSPDDANFVDAIHTFTREHMGL-SVGIKQPIAHYDFYPNGGSFQPGCHFLELYK 278

  Fly   362 -----FVGAVTDFIWSAQAAEDEEGRSLCNHRRAYKFFIDSVAPRCL-FPAFPCGNYDDFLKGRC 420
                 .:.|:|..|             .|.|.|:...||||:....| ...|.|.|.|.|.:|.|
  Rat   279 HIAEHGLNAITQTI-------------KCAHERSVHLFIDSLQHSNLQNTGFQCSNMDSFSQGLC 330

  Fly   421 FPCAQDDEDLAEGVPRCGNMGY--YADRSTGRGQLYLLTREEEPFCA--HQFQLQIFNSFN---- 477
            ..|.:.         ||.::||  ..||......|:|:||.:.||..  :||::|..|...    
  Rat   331 LNCKKG---------RCNSLGYDIRRDRPRKSKTLFLITRAQSPFKVYHYQFKIQFINQMEKPIE 386

  Fly   478 -DLPLRTIGRLEAILE-----GDG-GLNETFEI---SEKDDAE 510
             ...:..:|..|.|.:     |:| ..|:|:.:   .:||..|
  Rat   387 PTFTMTLLGTKEEIKKIPITLGEGITSNKTYSLLITLDKDIGE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6847NP_001285397.1 Lipase 70..463 CDD:278576 108/303 (36%)
Pancreat_lipase_like 185..459 CDD:238363 107/299 (36%)
LipcXP_006243421.1 Lipase 18..366 CDD:278576 108/303 (36%)
Pancreat_lipase_like 47..362 CDD:238363 107/299 (36%)
PLAT_LPL 369..504 CDD:238856 14/61 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D247005at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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