DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6847 and Lipc

DIOPT Version :10

Sequence 1:NP_573259.2 Gene:CG6847 / 32778 FlyBaseID:FBgn0030884 Length:1000 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:368 Identity:124/368 - (33%)
Similarity:176/368 - (47%) Gaps:75/368 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 VIVHGF-GSACPHV----------------WIYEMKTALMA--VEDCIVICVDWENGATFPNYVR 239
            :|:||: ||....|                ||:::..||.:  .:...|..|||.:.| :.:|..
  Rat    86 MIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLVDWISLA-YQHYAI 149

  Fly   240 AAANTRLVGKQLAMLLRNLQQHKGLDLMRTHVIGFSLGAHVSGFAGAELPG---LSRITGLDPAG 301
            |..|||:||:::|.||..|::.......:.|:||:|||||||||||:.:.|   :.|||||||||
  Rat   150 AVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSMGGKRKIGRITGLDPAG 214

  Fly   302 PLFEAQHPKVRLDSSDAEFVDVIHS-NGENLILGGLGSWQPMGHVDYYPNGGRVQTGCSNL---- 361
            |:||...|..||...||.|||.||: ..|::.| .:|..||:.|.|:|||||..|.||..|    
  Rat   215 PMFEGTSPNERLSPDDANFVDAIHTFTREHMGL-SVGIKQPIAHYDFYPNGGSFQPGCHFLELYK 278

  Fly   362 -----FVGAVTDFIWSAQAAEDEEGRSLCNHRRAYKFFIDSVAPRCL-FPAFPCGNYDDFLKGRC 420
                 .:.|:|..|             .|.|.|:...||||:....| ...|.|.|.|.|.:|.|
  Rat   279 HIAEHGLNAITQTI-------------KCAHERSVHLFIDSLQHSNLQNTGFQCSNMDSFSQGLC 330

  Fly   421 FPCAQDDEDLAEGVPRCGNMGY--YADRSTGRGQLYLLTREEEPFCA--HQFQLQIFNSFN---- 477
            ..|.:.         ||.::||  ..||......|:|:||.:.||..  :||::|..|...    
  Rat   331 LNCKKG---------RCNSLGYDIRRDRPRKSKTLFLITRAQSPFKVYHYQFKIQFINQMEKPIE 386

  Fly   478 -DLPLRTIGRLEAILE-----GDG-GLNETFEI---SEKDDAE 510
             ...:..:|..|.|.:     |:| ..|:|:.:   .:||..|
  Rat   387 PTFTMTLLGTKEEIKKIPITLGEGITSNKTYSLLITLDKDIGE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6847NP_573259.2 Pancreat_lipase_like 185..459 CDD:238363 107/299 (36%)
LipcXP_006243421.1 Lipase 18..366 CDD:395099 108/303 (36%)
PLAT_LPL 369..504 CDD:238856 14/61 (23%)

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