DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and KATNAL2

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001340828.1 Gene:KATNAL2 / 83473 HGNCID:25387 Length:564 Species:Homo sapiens


Alignment Length:455 Identity:168/455 - (36%)
Similarity:243/455 - (53%) Gaps:70/455 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TTLQKAIDLVTKA-TEEDRNKNYAEALRLYEHGVEYFLHTIKYEAQGEKAKDSIRAKCLQYLDRA 68
            ||..|..|  ||: .:|..|:...:..||  ....:.||..:  .:.:..:::...:..|.:|..
Human   158 TTAGKTGD--TKSLNKEHPNQEVVDNTRL--ESANFGLHISR--IRKDSGEENAHPRRGQIIDFQ 216

  Fly    69 EKLKEYLKKGKKKPIKEGGESS-AKDDKDKKSDSDDE--------DGDDPEKKKLQSKLEDAIVI 124
            ..|.:.:|         |..|. |.:..|...|..:.        .|.:.|.::|.:.:...|.:
Human   217 GLLTDAIK---------GATSELALNTFDHNPDPSERLLKPLSAFIGMNSEMRELAAVVSRDIYL 272

  Fly   125 EKPKVQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEA 189
            ..|.::|:|:.||||||:.:||||:.||::||||||...||||:||:|||||||:.||||||||.
Human   273 HNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGKTLLAKAVATEC 337

  Fly   190 NRSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSAR---SDNENDSVRR 251
             ::|||::|:|.::|||.|:|||||:.||||||.|.||.||:||::|:.|.|   |..|::...|
Human   338 -KTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLR 401

  Fly   252 IKTEFLVQMQGVGNDTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMF-----KIH 311
            :|||.||||.|:....|.:.||.|:|:||.||.|:.||.||||.:.||...||..|.     .:.
Human   402 MKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSREARQAMIYHWLPPVS 466

  Fly   312 LGNTTHVLTEQDLKELAGKTEGYSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVN 376
            ......:.||.:...|:.:||||||:||.:|.|:|.|.||||:..|..          ||:...:
Human   467 KSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDALE----------NHQSESS 521

  Fly   377 DLLVPCSPGDQGAVEMNWMDVPSDKLFEPPVTMRDMLKSLSRTKPTVNEDDLKKLRKFTEDFGQE 441
            ||     |..|       :|:         ||..|.|..|:.|||:.     |.|.:...|:.:|
Human   522 DL-----PRIQ-------LDI---------VTTADFLDVLTHTKPSA-----KNLAQRYSDWQRE 560

  Fly   442  441
            Human   561  560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141 13/63 (21%)
RecA-like_VPS4 126..296 CDD:410929 99/172 (58%)
AAA_lid_3 323..361 CDD:465537 18/37 (49%)
Vps4_C 379..439 CDD:462762 14/59 (24%)
KATNAL2NP_001340828.1 LisH 51..81 CDD:128913
RPT1 212..548 CDD:440835 151/381 (40%)
RecA-like_VPS4-like 282..446 CDD:410917 96/164 (59%)
Blue background indicates that the domain is not in the aligned region.

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