Protein Alignment Vps4 and AT3G27120

DIOPT Version :10

• Sequence 1: NP_573258.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Sequence 2: NP_001319654.1
• Gene: AT3G27120 / 822331
• AraportID: AT3G27120
• Length: 680
• Species: Arabidopsis thaliana
• Alignment Length: 432
• Identity: 152/432 - (35%)
• Similarity: 231/432 - (53%)
• Gaps: 73/432 - (16%)

  Fly    44 IKYEAQGEKAKDSIR--AKCLQ-----------YLDRAEKLKEYLKKGKKKPIKEGGES------ 89
            ||.|....:.:.|..  :.||.           |..|:..|:...:.....|:|..|.:
plant   282 IKLEMDVRQKRGSTESPSSCLSPQSDKNALGRGYGSRSGGLRRGYRSNFVPPVKTNGNNVGNLTS 346

  Fly    90 --SAKDDKDKKSDSD--------DEDGDDPEK-KKLQSKL----EDAIVIEKPKVQWSDVAGLDA 139
              ..|.| |...||.        ..||:.||| :.|:.:|    .:.|:...|.|:|.|:|||:.
plant   347 RIGGKTD-DALDDSTRTCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEH 410

  Fly   140 AKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMS 204
            ||:.:.|.||.|:..|.:|.|.|.|.||:||||||||||:.:.||:|.|| ::|||.:|:|.|.|
plant   411 AKKCVTEMVIWPLLRPDIFKGCRSPGKGLLLFGPPGTGKTMIGKAIAGEA-KATFFYISASSLTS 474

  Fly   205 KWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSAR-SDNENDSVRRIKTEFLVQMQGVGNDTD 268
            ||:||.||||:.||.:|...:|::||:|||||:.|.| ||.|::|.||:||:||::|:|..:.::
plant   475 KWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSE 539

  Fly   269 GILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARL-VMFKIHLGNTTHVLTEQDLKELAGKTE 332
            .||::||||.|..||.|.|||..||:|||||.:.||. ::..:...:....|::.|:..:...||
plant   540 QILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNLTE 604

  Fly   333 GYSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDV 397
            ||||:|:..:|:||.|.|:|:.     .||  |...||..:  :|:.:
plant   605 GYSGSDMKNLVKDATMGPLREA-----LKR--GIDITNLTK--DDMRL----------------- 643

  Fly   398 PSDKLFEPPVTMRDMLKSLSRTKPTVNEDDLKKLRKFTEDFG 439
                     ||::|...:|...:|:|::::|.....:...||
plant   644 ---------VTLQDFKDALQEVRPSVSQNELGIYENWNNQFG 676

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps4	NP_573258.1	MIT_VPS4	6..69	CDD:239141	8/37 (22%)
		RecA-like_VPS4	126..296	CDD:410929	90/170 (53%)
		AAA_lid_3	323..361	CDD:465537	14/37 (38%)
		Vps4_C	379..439	CDD:462762	7/59 (12%)
AT3G27120	NP_001319654.1	P-loop containing Nucleoside Triphosphate Hydrolases	382..567	CDD:476819	92/185 (50%)
		AAA_lid_3	593..>628	CDD:465537	14/39 (36%)
		Vps4_C	<644..676	CDD:462762	7/31 (23%)