Protein Alignment Vps4 and CCP1

DIOPT Version :9

• Sequence 1: NP_001285396.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Sequence 2: NP_973600.1
• Gene: CCP1 / 818020
• AraportID: AT2G34560
• Length: 393
• Species: Arabidopsis thaliana
• Alignment Length: 414
• Identity: 152/414 - (36%)
• Similarity: 223/414 - (53%)
• Gaps: 91/414 - (21%)

  Fly    69 EKLKEYLKKGKKKPIKEGGESSAK--DDKDKKSDSDDEDG----------------------DDP 109
            :||.|.....|.:|  |.|.|:..  |..:..|...::||                      :..
plant    27 KKLPEEDVSNKDQP--EDGSSNGNNGDVNNNSSPVTNQDGNTALANGNVIREKPKKSMFPPFESA 89

  Fly   110 EKKKLQSKLEDAIVIEKPKVQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPP 174
            |.:.|...|...|:...|.::|..:.||:.||:.|||||::|||:|..|.|...|||||||||||
plant    90 ETRTLAESLSRDIIRGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGLLTPWKGILLFGPP 154

  Fly   175 GTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCS 239
            ||||:.||||||||.| :|||::|:|.::|||.|:||||::.||:|||.|.||.||:||||::.|
plant   155 GTGKTMLAKAVATECN-TTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAPSTIFLDEIDAIIS 218

  Fly   240 ARSD---NENDSVRRIKTEFLVQMQGVGNDTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEA 301
            .|..   :|:::.||:|||.|:||.|:....:.:.||.|||:||.||:|:.||.||||.:|||:.
plant   219 QRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAATNLPWELDAAMLRRLEKRILVPLPDP 283

  Fly   302 HARLVMFKIHLGNTTHVLTEQDLKE------LAGKTEGYSGADISIVVRDALMEPVRKVQTATHF 360
            .||..||::       ::..|...|      |..|:|||||:||.|:.::|.|:|:|:......
plant   284 EARRGMFEM-------LIPSQPGDEPLPHDVLVEKSEGYSGSDIRILCKEAAMQPLRRTLAILE- 340

  Fly   361 KRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDVPSDKLFEP---PVTMRDMLKSLSRTKPT 422
                     :.|::                      ||.|:|  |   |:...|:.::||.|:|:
plant   341 ---------DREDV----------------------VPEDEL--PKIGPILPEDIDRALSNTRPS 372

  Fly   423 VNEDDLKKLR-----KFTEDFGQE 441
            .:      |.     ||.:|:|.:
plant   373 AH------LHAHLYDKFNDDYGSQ 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps4	NP_001285396.1	MIT_VPS4	6..69	CDD:239141	152/414 (37%)
		RecA-like_VPS4	126..296	CDD:410929	96/172 (56%)
		AAA_lid_3	323..361	CDD:407720	15/43 (35%)
		Vps4_C	379..439	CDD:401324	15/67 (22%)
CCP1	NP_973600.1	RecA-like_VPS4-like	114..278	CDD:410917	94/164 (57%)
		AAA_lid_3	306..343	CDD:407720	14/46 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D787710at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920