DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and katnal2

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001410682.1 Gene:katnal2 / 641431 ZFINID:ZDB-GENE-051113-156 Length:525 Species:Danio rerio


Alignment Length:470 Identity:167/470 - (35%)
Similarity:229/470 - (48%) Gaps:113/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LYEHGVEYFLHTIKY-------EAQGEKAKDSIRAKCLQYLDRAEKL-----KEYLKKGKKKPIK 84
            |.|:...||:...||       ..|||..:.....|....|.|...:     :..:||.:.|  .
Zfish    72 LMEYESYYFIKFQKYPKLTKKLAEQGENRRIKSCGKRSHTLPRINSIQRPSSRNTVKKSESK--L 134

  Fly    85 EGGESSAKDDKDKKSDSDD---------------EDGDDPEKKKLQSKLEDA------------- 121
            .|.:.|...|.|:.:.:|.               |:|....|...::.::||             
Zfish   135 TGRDFSKSSDGDRLTSADTLGFGLNVSPIIRNGAEEGTHMRKIDYRNLIQDAVRGAANDTLHNAD 199

  Fly   122 -------------------------------IVIEKPKVQWSDVAGLDAAKEALKEAVILPIKFP 155
                                           |.:..|.|:|.|:.||:|||..:||||:.|||:|
Zfish   200 FTEQERLLKPVSALIGMNSDMKELAAVISRDIYLHNPNVRWDDIIGLEAAKRLVKEAVVYPIKYP 264

  Fly   156 QLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKLVKNLFEL 220
            |||||...||||:||:|||||||:.||||||||.| :|||::|:|.::|||.|:|||||:.||||
Zfish   265 QLFTGILSPWKGLLLYGPPGTGKTMLAKAVATECN-TTFFNISASSIVSKWRGDSEKLVRVLFEL 328

  Fly   221 ARQHKPSIIFIDEIDSMCSAR---SDNENDSVRRIKTEFLVQMQGVGNDTDGILVLGATNIPWVL 282
            ||.|.||.||:||::|:.|.|   ...:::..||:|||.||||.|:....|.:.||.|:|:||.|
Zfish   329 ARYHAPSTIFLDELESVMSQRGVGQGGDHEGSRRMKTELLVQMDGLARSNDLVFVLAASNLPWEL 393

  Fly   283 DSAIRRRFEKRIYIPLPEAHARLVMFKIHL---GNT--THVLTEQDLKELAGKTEGYSGADISIV 342
            |.|:.||.||||.:.||.|.||..|....|   .||  ..:.||.|...||.:|.||||:||.:|
Zfish   394 DHAMLRRLEKRILVSLPSAPARQAMISHWLPPVSNTGGVELRTELDYDSLAQETGGYSGSDIRLV 458

  Fly   343 VRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDVPSDKLFEPPV 407
            .::|.|.||||:..|..          ||.|..:::.|         :|:.            .|
Zfish   459 CKEAAMRPVRKIFDALE----------NHIEGQSNMPV---------IELE------------TV 492

  Fly   408 TMRDMLKSLSRTKPT 422
            |..|.|..:..|||:
Zfish   493 TTADFLDVIVHTKPS 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141 12/43 (28%)
RecA-like_VPS4 126..296 CDD:410929 100/172 (58%)
AAA_lid_3 323..361 CDD:465537 18/37 (49%)
Vps4_C 379..439 CDD:462762 9/44 (20%)
katnal2NP_001410682.1 LisH 25..55 CDD:128913
RPT1 165..501 CDD:440835 144/367 (39%)
Blue background indicates that the domain is not in the aligned region.

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