DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and katnal1

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001007432.1 Gene:katnal1 / 492790 ZFINID:ZDB-GENE-041114-141 Length:488 Species:Danio rerio


Alignment Length:370 Identity:163/370 - (44%)
Similarity:215/370 - (58%) Gaps:47/370 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 KGKKKPIKEGGESSAKDDKDKKSDSDDEDGDDPEKKKLQSKLEDAIVIEKPKVQWSDVAGLDAAK 141
            |.|::..|...:..|.|.:.||.|....|.|      |...||..||...|.:.|.|:|.|:.||
Zfish   157 KAKEEKSKRNAQEGAADVEQKKFDGTGYDSD------LVDALERDIVSRNPNIHWDDIADLEDAK 215

  Fly   142 EALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKW 206
            :.|:|||:||:..|..|.|.|.||||:|:.|||||||:.||||||||.. :|||:||||.|.||:
Zfish   216 KLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECG-TTFFNVSSSTLTSKY 279

  Fly   207 LGESEKLVKNLFELARQHKPSIIFIDEIDSMCSAR-SDNENDSVRRIKTEFLVQMQGVGNDTDG- 269
            .|||||||:.|||:||.:.|:.||||||||:|..| :.:|:::.||:|:|.||||.|||...:. 
Zfish   280 RGESEKLVRLLFEMARFYAPTTIFIDEIDSICGRRGTSDEHEASRRVKSELLVQMDGVGGAQESE 344

  Fly   270 -----ILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMFKIHLGNTTHVLTEQDLKELAG 329
                 ::||.|||.||.:|.|:|||.|||||||||.|..|..:.||:| ....|.::.||...|.
Zfish   345 DPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLPTAKGRAELLKINL-REVDVASDVDLTVFAE 408

  Fly   330 KTEGYSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNW 394
            |.||||||||:.|.|||.|..:|        :|:.|.||   |||                    
Zfish   409 KIEGYSGADITNVCRDASMMAMR--------RRIQGLSP---EEI-------------------- 442

  Fly   395 MDVPSDKLFEPPVTMRDMLKSLSRTKPTVNEDDLKKLRKFTEDFG 439
            ..:..|:| :.||||.|...:|.:...:|:..||:|...:..:||
Zfish   443 RALSKDEL-QMPVTMEDFELALKKISKSVSAADLEKYESWMSEFG 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141
RecA-like_VPS4 126..296 CDD:410929 98/176 (56%)
AAA_lid_3 323..361 CDD:465537 18/37 (49%)
Vps4_C 379..439 CDD:462762 12/59 (20%)
katnal1NP_001007432.1 Kp60-NTD 5..72 CDD:439297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..184 8/26 (31%)
RecA-like_KTNA1 207..376 CDD:410930 96/169 (57%)
AAA_lid_3 400..444 CDD:465537 25/74 (34%)
Vps4_C <448..486 CDD:462762 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.

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