DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and FIGNL2

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_016874787.1 Gene:FIGNL2 / 401720 HGNCID:13287 Length:767 Species:Homo sapiens


Alignment Length:458 Identity:114/458 - (24%)
Similarity:189/458 - (41%) Gaps:93/458 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QKAIDLVTKATE---EDRNKNYAEALRLYEHGVEYFLHTIKYEA--QGEKAKDSIRAKCLQYLDR 67
            :..:.|..||.:   |.|.:.||     ||...........|.|  .||...:..|||.....:.
Human   374 ESGLSLKRKAADEGPEGRYRKYA-----YEPAKAPVADGASYPAADNGECRGNGFRAKPPGAAEE 433

  Fly    68 AE-------------------KLKEYLKKGKKKPIKEGGESSAKDDKDKKSDSDDEDGDDPEKKK 113
            |.                   :|:.:.|..::.|...||.:....:..|        |.||...:
Human   434 ASGKYGGGVPLKVLGSPVYGPQLEPFEKFPERAPAPRGGFAVPSGETPK--------GVDPGALE 490

  Fly   114 L-QSKLEDAIVIEKPKVQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTG 177
            | .||:.|.    .|.|||:||||..|.|.||:|.::.|:..|..:.|...|.:.:|||||.|.|
Human   491 LVTSKMVDC----GPPVQWADVAGQGALKAALEEELVWPLLRPPAYPGSLRPPRTVLLFGPRGAG 551

  Fly   178 KSYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSARS 242
            |:.|.:.:||:.. :|...:..:.|.:....|..:|::..|..||...||::.|.|::::..||.
Human   552 KALLGRCLATQLG-ATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLISELEALLPARD 615

  Fly   243 DNENDSVRRIKTEFLVQMQ-GVGNDTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARLV 306
            |.. .:...::...|..:. |.|...||:||:|.|:.|..||.|.||||..|.|:.||::.||..
Human   616 DGA-AAGGALQVPLLACLDGGCGAGADGVLVVGTTSRPAALDEATRRRFSLRFYVALPDSPARGQ 679

  Fly   307 MFKIHLGNTTHVLTEQDLKELAGKTEGYSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNH 371
            :.:..|......|:|::|..|...|:|:||.::..:                             
Human   680 ILQRALAQQGCALSERELAALVQGTQGFSGGELGQL----------------------------- 715

  Fly   372 EEIVNDLLVPCSPGDQGAVEMNWMDVPSDKLFEPPVTMRDMLKSLSRTKPTVNEDDLKKLRKFTE 436
                      |.....||      .:|.   .:.|::.:|:..:|::..|..:..:|....::.:
Human   716 ----------CQQAAAGA------GLPG---LQRPLSYKDLEAALAKVGPRASAKELDSFVEWDK 761

  Fly   437 DFG 439
            .:|
Human   762 MYG 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141 16/65 (25%)
RecA-like_VPS4 126..296 CDD:410929 60/170 (35%)
AAA_lid_3 323..361 CDD:465537 6/37 (16%)
Vps4_C 379..439 CDD:462762 9/59 (15%)
FIGNL2XP_016874787.1 RecA-like_fidgetin 507..669 CDD:410931 56/163 (34%)
HflB <643..>720 CDD:440233 28/115 (24%)

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