Protein Alignment Vps4 and atad1a

DIOPT Version :10

• Sequence 1: NP_573258.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Sequence 2: NP_001004640.1
• Gene: atad1a / 368672
• ZFINID: ZDB-GENE-030616-593
• Length: 380
• Species: Danio rerio
• Alignment Length: 427
• Identity: 126/427 - (29%)
• Similarity: 202/427 - (47%)
• Gaps: 73/427 - (17%)

  Fly    22 RNKNYAEALRLYEHGVEYFLHTIKYEAQGEKAKDSIRAKCLQYLDRAEKLKEYLKKGKKKPIKEG 86
            ||:.....:||...|...: ::||:              .:..||..:|.|...||..::.:|:.
Zfish    16 RNEVVGMLVRLTVFGAATY-YSIKW--------------VVDALDPTQKQKSQAKKRAEQLMKQI 65

  Fly    87 GESSAKDDKDKKSDSDDEDGDDPEKKKLQSKLEDAIVIEKP---KVQWSDVAGLDAAKEALKEAV 148
            |....                    ...:.::..|.::..|   ||.|.||||||.....:::.|
Zfish    66 GVEGV--------------------SLTEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTV 110

  Fly   149 ILPIKFPQLFTGKRI--PWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGESE 211
            |||.:...||:|.::  |.||:||:||||.||:.:|||.| :|:...|.::.:|.|..||.|||:
Zfish   111 ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKATA-KASGCRFINLQASTLTDKWYGESQ 174

  Fly   212 KLVKNLFELARQHKPSIIFIDEIDSMCSARSDNENDSVRRIKTEFLVQMQGVG-NDTDGILVLGA 275
            ||...:|.||.:.:|.|||:|||||....||..::::...:|.:|:....|:. .:...::|:||
Zfish   175 KLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLDTGENSQVMVMGA 239

  Fly   276 TNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMFKIHLG--NTTHVLTEQDLKELAGKTEGYSGAD 338
            ||.|..:|:||.||.....::.||.|..|..:.::.|.  |.::.:   :|||:|.::|||||:|
Zfish   240 TNRPQDVDAAILRRMPTAFHVGLPNAAQREEILRLILSGENLSNAI---NLKEIASQSEGYSGSD 301

  Fly   339 ISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDVPSDKLF 403
            :..:.|||.|..||........|:::.....:.||                     ..|.|.:|
Zfish   302 LKELCRDAAMYRVRDYVRKQQMKQIAQQFQLDEEE---------------------EHVDSRQL- 344

  Fly   404 EPPVTMRDMLKSLSR---TKPTVNEDDLKKLRKFTED 437
             .|||..|:|..|.:   :|......|...||:...|
Zfish   345 -RPVTQLDLLFGLDKMRESKQATATTDPANLREVPLD 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps4	NP_573258.1	MIT_VPS4	6..69	CDD:239141	9/46 (20%)
		RecA-like_VPS4	126..296	CDD:410929	71/175 (41%)
		AAA_lid_3	323..361	CDD:465537	16/37 (43%)
		Vps4_C	379..439	CDD:462762	14/62 (23%)
atad1a	NP_001004640.1	SpoVK	1..343	CDD:440232	114/386 (30%)
		RecA-like_ATAD1	95..260	CDD:410928	67/165 (41%)