Protein Alignment Vps4 and Atad1

DIOPT Version :10

• Sequence 1: NP_573258.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Sequence 2: NP_001030174.1
• Gene: Atad1 / 309532
• RGDID: 1308570
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 397
• Identity: 139/397 - (35%)
• Similarity: 198/397 - (49%)
• Gaps: 63/397 - (15%)

  Fly    22 RNKNYAEALRLYEHG-VEYFLHTIKYEAQGEKAKDSIRAKCLQYLDRAEKLKEYLKKGKKKPIKE 85
            ||:......||...| |.||  |||:              .:..:|...|.|...:|..:|.:|:
  Rat    13 RNEVVGLIFRLTIFGAVTYF--TIKW--------------MVDAIDPTRKQKVEAQKQAEKLMKQ 61

  Fly    86 GGESSAKDDKDKKSDSDDEDGDDPEKKKLQSKLEDAIVIEKPKVQWSDVAGLDAAKEALKEAVIL 150
            .|..:.|..:.:.|              :.:.|.|.:.:.   |.|||:||||.....||:.|||
  Rat    62 IGVKNVKLSEYEMS--------------IAAHLVDPLNMH---VTWSDIAGLDDVITDLKDTVIL 109

  Fly   151 PIKFPQLFTGKRI--PWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKL 213
            |||...||...|:  |.||:||:||||.||:.:|||.|.||. ..|.::..|.|..||.|||:||
  Rat   110 PIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAG-CRFINLQPSTLTDKWYGESQKL 173

  Fly   214 VKNLFELARQHKPSIIFIDEIDSMCSARSDNENDSVRRIKTEFLVQMQGVGNDTD---GILVLGA 275
            ...:|.||.:.:|||||||||||....||.:::::...:|.:|:....|:  |||   .::|:||
  Rat   174 AAAVFSLAIKLQPSIIFIDEIDSFLRNRSSSDHEATAMMKAQFMSLWDGL--DTDHSCQVIVMGA 236

  Fly   276 TNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMFKIHLGNTT---HVLTEQDLKELAGKTEGYSGA 337
            ||.|..|||||.||...|.:|..|....|..:.|:.|.|..   ||    ||.|:|.:|:|:||:
  Rat   237 TNRPQDLDSAIMRRMPTRFHINQPALKQREAILKLILKNENVDRHV----DLLEVAQETDGFSGS 297

  Fly   338 DISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGD-QGAVEMNWMDVPSDK 401
            |:..:.|||.:..||:.        |:..|..:|:|   |.:.|....| ..|:|.  |....|.
  Rat   298 DLKEMCRDAALLCVREY--------VNSTSEESHDE---DEIRPVQQQDLHRAIEK--MKKSKDA 349

  Fly   402 LFEPPVT 408
            .|:..:|
  Rat   350 AFQSVLT 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps4	NP_573258.1	MIT_VPS4	6..69	CDD:239141	12/47 (26%)
		RecA-like_VPS4	126..296	CDD:410929	82/174 (47%)
		AAA_lid_3	323..361	CDD:465537	14/37 (38%)
		Vps4_C	379..439	CDD:462762	8/31 (26%)
Atad1	NP_001030174.1	SpoVK	4..344	CDD:440232	135/383 (35%)
		RecA-like_ATAD1	92..257	CDD:410928	79/167 (47%)