Protein Alignment Vps4 and Katnal2

DIOPT Version :9

• Sequence 1: NP_001285396.1
• Gene: Vps4 / 32777
• FlyBaseID: FBgn0283469
• Length: 442
• Species: Drosophila melanogaster
• Sequence 2: XP_006255033.1
• Gene: Katnal2 / 307253
• RGDID: 1564708
• Length: 537
• Species: Rattus norvegicus
• Alignment Length: 512
• Identity: 169/512 - (33%)
• Similarity: 245/512 - (47%)
• Gaps: 125/512 - (24%)

  Fly     1 MAAGTTLQKAIDLVTKATEEDRNKNYAEALRLYEHGVEYFLHTIKYEAQGEKAKDSI-------- 57
            |.|...|::...|..:..|...|.:....|..||.  .||:...||....:||.|.:
  Rat    43 MDAANALEEETKLGLRRFEVCDNVDLETILMEYES--YYFVKFQKYPKVVKKASDQVENNISSRS 105

  Fly    58 --RAKCLQYLDRAEKL-KEYLKKGKKK--PIKEGGESSAKDDKDKKS------------------ 99
              :.|.|.. |..:.| |.|.:|.:.|  .:|.|...|.|:...::|
  Rat   106 GGKNKRLTN-DNCQNLPKIYHQKSRPKTSTVKTGDTKSVKEHPKQESVTNAQAESSDFGLNISKI 169

  Fly   100 --DSDDED-------------------------------------------------GDDPEKKK 113
              ||.:|.                                                 |.:.|.::
  Rat   170 HKDSPEEKAHPRRGQIIDFRGLLTDAIKGATSEYALNTFECNPDPSERLLKPLSAFIGMNSEMRE 234

  Fly   114 LQSKLEDAIVIEKPKVQWSDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGK 178
            |.:.:...|.:..|.::|:|:.||||||:.:||||:.||::||||||...||||:||:|||||||
  Rat   235 LAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGLLLYGPPGTGK 299

  Fly   179 SYLAKAVATEANRSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSARS- 242
            :.||||||||. ::|||::|:|.::|||.|:|||||:.||||||.|.||.||:||::|:.|.|.
  Rat   300 TLLAKAVATEC-KTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGM 363

  Fly   243 --DNENDSVRRIKTEFLVQMQGVGNDTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARL 305
              ..|::...|:|||.||||.|:....|.:.||.|:|:||.||.|:.||.||||.:.||...||.
  Rat   364 VPGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLRRLEKRILVDLPSQEARQ 428

  Fly   306 VMF-----KIHLGNTTHVLTEQDLKELAGKTEGYSGADISIVVRDALMEPVRKVQTATHFKRVSG 365
            .|.     .:...:...:.|:.:...|:.:||||||:||.:|.|:|.|.||||:.....
  Rat   429 AMIYHWLPPVSKNHALELRTQLEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFNVLE------ 487

  Fly   366 PSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDVPSDKLFEPPVTMRDMLKSLSRTKPT 422
                ||:...::||         .::::            .||..|.|..|:.|||:
  Rat   488 ----NHQSESSNLL---------GIQLD------------TVTTEDFLDVLAHTKPS 519

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vps4	NP_001285396.1	MIT_VPS4	6..69	CDD:239141	17/72 (24%)
		RecA-like_VPS4	126..296	CDD:410929	98/172 (57%)
		AAA_lid_3	323..361	CDD:407720	17/37 (46%)
		Vps4_C	379..439	CDD:401324	9/44 (20%)
Katnal2	XP_006255033.1	LisH	25..55	CDD:128913	3/11 (27%)
		AAA	285..422	CDD:214640	77/137 (56%)
		AAA	289..421	CDD:278434	73/132 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D787710at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920