| Sequence 1: | NP_001285396.1 | Gene: | Vps4 / 32777 | FlyBaseID: | FBgn0283469 | Length: | 442 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006255622.2 | Gene: | Vps4a / 246772 | RGDID: | 628810 | Length: | 447 | Species: | Rattus norvegicus |
| Alignment Length: | 425 | Identity: | 314/425 - (73%) |
|---|---|---|---|
| Similarity: | 358/425 - (84%) | Gaps: | 13/425 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 TTLQKAIDLVTKATEEDRNKNYAEALRLYEHGVEYFLHTIKYEAQGEKAKDSIRAKCLQYLDRAE 69
Fly 70 KLKEYLK---KGKKKPIKEGGESSAKDDKDKKSDSDDEDGDDPEKKKLQSKLEDAIVIEKPKVQW 131
Fly 132 SDVAGLDAAKEALKEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANRSTFFS 196
Fly 197 VSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEIDSMCSARSDNENDSVRRIKTEFLVQMQ 261
Fly 262 GVGNDTDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMFKIHLGNTTHVLTEQDLKE 326
Fly 327 LAGKTEGYSGADISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVE 391
Fly 392 MNWMDVPSDKLFEPPVTM-RDMLKSL--SRTKPTV 423 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Vps4 | NP_001285396.1 | MIT_VPS4 | 6..69 | CDD:239141 | 51/62 (82%) |
| RecA-like_VPS4 | 126..296 | CDD:410929 | 146/169 (86%) | ||
| AAA_lid_3 | 323..361 | CDD:407720 | 29/37 (78%) | ||
| Vps4_C | 379..439 | CDD:401324 | 29/48 (60%) | ||
| Vps4a | XP_006255622.2 | PTZ00454 | 4..348 | CDD:240423 | 268/350 (77%) |
| MIT_VPS4 | 4..79 | CDD:239141 | 58/74 (78%) | ||
| P-loop_NTPase | 128..>182 | CDD:304359 | 48/53 (91%) | ||
| AAA | 163..293 | CDD:278434 | 115/129 (89%) | ||
| Vps4_C | 374..>404 | CDD:286426 | 22/29 (76%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 239 | 1.000 | Domainoid score | I2201 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0739 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H69132 | |
| Inparanoid | 1 | 1.050 | 670 | 1.000 | Inparanoid score | I704 |
| OMA | 1 | 1.010 | - | - | QHG53561 | |
| OrthoDB | 1 | 1.010 | - | - | D321685at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002106 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45243 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100670 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23074 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1557 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.840 | |||||