DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and Kat60

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_003435935.1 Gene:Kat60 / 1281382 VectorBaseID:AGAMI1_001618 Length:573 Species:Anopheles gambiae


Alignment Length:74 Identity:19/74 - (25%)
Similarity:29/74 - (39%) Gaps:18/74 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KTPYNQLPMLEVDGKPLAQSHAMARYLAREFGFNGKSRW-------EEAQVNSLADQYKDYYAEA 104
            |||:...|:||.|...: .|.|:|..|          .|       ...:||:|.....|:..:.
Mosquito     5 KTPFLVNPLLEADILKV-NSAALAPLL----------EWLCLTPKVTTYRVNTLRCSVDDFRKKL 58

  Fly   105 RPYLAVKLG 113
            ...||::.|
Mosquito    59 EEKLAIRYG 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141 8/21 (38%)
RecA-like_VPS4 126..296 CDD:410929
AAA_lid_3 323..361 CDD:465537
Vps4_C 379..439 CDD:462762
Kat60XP_003435935.1 Kp60-NTD 11..79 CDD:439297 16/68 (24%)
RecA-like_KTNA1 296..461 CDD:410930
AAA_lid_3 485..529 CDD:465537
Vps4_C <529..571 CDD:462762
Blue background indicates that the domain is not in the aligned region.

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