DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vps4 and spas

DIOPT Version :10

Sequence 1:NP_573258.1 Gene:Vps4 / 32777 FlyBaseID:FBgn0283469 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_061504441.1 Gene:spas / 1273633 VectorBaseID:AGAMI1_003042 Length:888 Species:Anopheles gambiae


Alignment Length:367 Identity:149/367 - (40%)
Similarity:210/367 - (57%) Gaps:55/367 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 KKPIKEGGESSAKDDKDKKSDSDDEDGDDPEKKKLQSKLEDAIVIEKPKVQWSDVAGLDAAKEAL 144
            |.|:  .|:...:..:.::.......|.:|   ||...:.|.||....||||.|:||.:.||:||
Mosquito   566 KTPL--AGQQPQQPQQQQQQPQISVKGVEP---KLVQIIMDEIVEGGAKVQWQDIAGQEVAKQAL 625

  Fly   145 KEAVILPIKFPQLFTGKRIPWKGILLFGPPGTGKSYLAKAVATEANRSTFFSVSSSDLMSKWLGE 209
            :|.||||...|:||||.|.|.||:|||||||.||:.||:|||||.: :||||:|::.|.||::|:
Mosquito   626 QEMVILPSVRPELFTGLRTPAKGLLLFGPPGNGKTLLARAVATECS-ATFFSISAATLTSKYVGD 689

  Fly   210 SEKLVKNLFELARQHKPSIIFIDEIDSMCSARSDNENDSVRRIKTEFLVQMQGV--GNDTDGILV 272
            .||||:.||.:||:.:||||||||:||:.|.||.||:::.||:|||||||..|:  .::.|.|:|
Mosquito   690 GEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSEADRIVV 754

  Fly   273 LGATNIPWVLDSAIRRRFEKRIYIPLPEAHARLVMFKIHLGNTTHVLTEQDLKELAGKTEGYSGA 337
            :.|||.|..||.|..|||.||:|:.||:...|.::.:..|......|::.||..||..||||||:
Mosquito   755 MAATNRPQELDEAALRRFPKRVYVTLPDRDTRELLLRRLLQKQGSPLSDADLAHLAQLTEGYSGS 819

  Fly   338 DISIVVRDALMEPVRKVQTATHFKRVSGPSPTNHEEIVNDLLVPCSPGDQGAVEMNWMDVPSDKL 402
            |::.:.|||.:||:|::               |.||:.|                  ||      
Mosquito   820 DLTALARDAALEPIREL---------------NVEEVKN------------------MD------ 845

  Fly   403 FEPPVTMR-----DMLKSLSRTKPTVNEDDLKKLRKFTEDFG 439
               |..:|     |...||.|.:.:|....|....|:.:|||
Mosquito   846 ---PTKLRSIRESDFHNSLKRIRRSVAPQSLAAYEKWLQDFG 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vps4NP_573258.1 MIT_VPS4 6..69 CDD:239141
RecA-like_VPS4 126..296 CDD:410929 98/171 (57%)
AAA_lid_3 323..361 CDD:465537 17/37 (46%)
Vps4_C 379..439 CDD:462762 12/64 (19%)
spasXP_061504441.1 None
Blue background indicates that the domain is not in the aligned region.

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