DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gss1 and Gss2

DIOPT Version :9

Sequence 1:NP_788925.2 Gene:Gss1 / 32775 FlyBaseID:FBgn0030882 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_728118.2 Gene:Gss2 / 318053 FlyBaseID:FBgn0052495 Length:562 Species:Drosophila melanogaster


Alignment Length:562 Identity:562/562 - (100%)
Similarity:562/562 - (100%) Gaps:0/562 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSDANTAVLRNCIRLPLAEDELLEVTAKAKDYAIMHGAAMRSKTAFSPDSLNFAPFVLVPSSFP 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MSSDANTAVLRNCIRLPLAEDELLEVTAKAKDYAIMHGAAMRSKTAFSPDSLNFAPFVLVPSSFP 65

  Fly    66 RKEFEKAVALQPIINRLMHNVAHDEEFITTTLAETIKVDEFTANLFNIYRKVLAHGFTQKTSLGM 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 RKEFEKAVALQPIINRLMHNVAHDEEFITTTLAETIKVDEFTANLFNIYRKVLAHGFTQKTSLGM 130

  Fly   131 LRSDLMLESGCPELSPRALRTAAGEDRGQDAGAAVGQIAGANGAAGVGTAAGTGSKEEEHREVQL 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 LRSDLMLESGCPELSPRALRTAAGEDRGQDAGAAVGQIAGANGAAGVGTAAGTGSKEEEHREVQL 195

  Fly   196 SRVTKEPERRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRFVLSELGHADKLHNMPDNNA 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   196 SRVTKEPERRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRFVLSELGHADKLHNMPDNNA 260

  Fly   261 LAGLCDGMVKAWDIYAKPQAVILFIIEDVSYNICDQRFHEFYIRETYPHIKVLRRTLTEVHREGK 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   261 LAGLCDGMVKAWDIYAKPQAVILFIIEDVSYNICDQRFHEFYIRETYPHIKVLRRTLTEVHREGK 325

  Fly   326 LGQSKELLLGSQEVAVIYFRAGYEPGHYHSQADWDARYLMETSLAIKCPSIHYHLAGTKKVQQAL 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 LGQSKELLLGSQEVAVIYFRAGYEPGHYHSQADWDARYLMETSLAIKCPSIHYHLAGTKKVQQAL 390

  Fly   391 AQPAVLERFINDPEEIKAVGKIFTGLYSLDDNEAGNASYEMALRTPERFVLKPQREGGGNNVYGV 455
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   391 AQPAVLERFINDPEEIKAVGKIFTGLYSLDDNEAGNASYEMALRTPERFVLKPQREGGGNNVYGV 455

  Fly   456 DIPDALKRMSRVERSAWILMDLIHPPLTKGYMVRPGGDMPPQIVDMVSELGIFGVVIGDAEHIVH 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   456 DIPDALKRMSRVERSAWILMDLIHPPLTKGYMVRPGGDMPPQIVDMVSELGIFGVVIGDAEHIVH 520

  Fly   521 NYQAGHMLRTKLSTANEGGVAAGLGALDSPYLIDSDDEDEQK 562
            ||||||||||||||||||||||||||||||||||||||||||
  Fly   521 NYQAGHMLRTKLSTANEGGVAAGLGALDSPYLIDSDDEDEQK 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gss1NP_788925.2 GSH_synth_ATP 20..552 CDD:281854 531/531 (100%)
Gss2NP_728118.2 GSH_synth_ATP 20..552 CDD:281854 531/531 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449433
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0021
Homologene 1 1.000 - - H148
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1620
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101596
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.680

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