DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Fibcd1

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_849218.2 Gene:Fibcd1 / 98970 MGIID:2138953 Length:459 Species:Mus musculus


Alignment Length:328 Identity:103/328 - (31%)
Similarity:165/328 - (50%) Gaps:41/328 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DELKNQVNAMSETIKDLQT-----RIGHKNELLLLQAG--QIKDQSARLNVLIKNMKVLRSECLN 117
            |.|.:|:..:.....:||.     |.||.    ||..|  .::.:..||..|:...:...:..:|
Mouse   136 DALADQLPRLLTRASELQAECAGLRKGHS----LLGQGLSTLQSEQGRLIQLLSESQGHMAHLVN 196

  Fly   118 AQAEI-KSKDIQIQLSAAKIKQMSNELVTQCSRQDTCP------------IDGK--GGIYKLKIR 167
            :.::: ::...:..|...::|.......::.:|...|.            :.|:  .|:|.:...
Mouse   197 SVSDVLEALQRERGLGRPRVKADLQRAPSRGARPRGCANGSRPRDCLDVLLSGQQDDGVYSIFPT 261

  Fly   168 ELPA-FEAPC----SSNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRR 227
            ..|| |:..|    ...||...|:|.||:.||.|||:.|::|||::.||.::||:::|.:|.|..
Mouse   262 HYPAGFQVYCDMRTDGGGWTVFQRREDGSVNFFRGWEAYREGFGKLTGEHWLGLKRIHALTTQAA 326

  Fly   228 HELYIKLGKIDGTTSHAHYDNFELG-----GEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDK 287
            :||::.|...|..|::|||.:|.:|     .|.:.|.| ::..|:|||||||..|...:|||.|:
Mouse   327 YELHVDLEDFDNGTAYAHYGSFGVGLFSVDPEEDGYPL-TVADYSGTAGDSLLKHSGMRFTTKDR 390

  Fly   288 DNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMM 352
            |:|....||||...|.|||.:|..|.|||::.:...:  ...:|:.|.||  ..|.|||.|.||.
Mouse   391 DSDHSENNCAAFYRGAWWYRNCHTSNLNGQYLRGAHA--SYADGVEWSSW--TGWQYSLKFSEMK 451

  Fly   353 IRP 355
            |||
Mouse   452 IRP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 83/206 (40%)
Fibcd1NP_849218.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
FReD 239..455 CDD:238040 84/221 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H122246
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.910

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