DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and TNR

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_003276.3 Gene:TNR / 7143 HGNCID:11953 Length:1358 Species:Homo sapiens


Alignment Length:364 Identity:109/364 - (29%)
Similarity:168/364 - (46%) Gaps:70/364 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ILSLSISTSLAN--DPQRSFDQNADNPCSAHRIWVWRPILDRFAKVNSSDELKNQVNAMSETIKD 75
            :.|.:|||:.:.  ||..:...:.....||  :..|:|         ...|::|.|.....|   
Human  1028 LTSGTISTNFSTLLDPPANLTASEVTRQSA--LISWQP---------PRAEIENYVLTYKST--- 1078

  Fly    76 LQTRIGHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSKDIQIQLSAAKIKQMS 140
                .|.:.||::    ..:|...||..|::|                 .|..:.|.||:....|
Human  1079 ----DGSRKELIV----DAEDTWIRLEGLLEN-----------------TDYTVLLQAAQDTTWS 1118

  Fly   141 NELVT------------QCSRQDTCPIDGKGGIYKLKI-----RELPAF-EAPCSSNGWLTIQKR 187
            :...|            |...|.....|...|:|.:.:     ::|..: :......||:..|:|
Human  1119 SITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLNGELSQKLQVYCDMTTDGGGWIVFQRR 1183

  Fly   188 YDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDG-TTSHAHYDNFEL 251
            .:|..:|.|.|.||:.|||.|..||::||:.:|.:|.|.|:||.:.:.  || ..:.|.||.|.:
Human  1184 QNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYELRVDMR--DGQEAAFASYDRFSV 1246

  Fly   252 GGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNG 316
            ......|:|: :|.|||||||||..|:.:.|:|.|:|||....|||....|.|||.:|.::.|||
Human  1247 EDSRNLYKLR-IGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNG 1310

  Fly   317 KFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            |:   |.||:  :.||.|..|..::  :|:.||||.:||
Human  1311 KY---GESRH--SQGINWYHWKGHE--FSIPFVEMKMRP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 78/203 (38%)
TNRNP_003276.3 EGF_2 <208..230 CDD:285248
EGF_2 267..292 CDD:285248
EGF_2 299..323 CDD:285248
fn3 328..398 CDD:278470
fn3 416..496 CDD:278470
fn3 505..583 CDD:278470
FN3 595..679 CDD:238020
fn3 687..766 CDD:278470
fn3 776..855 CDD:278470
fn3 865..944 CDD:278470
fn3 954..1026 CDD:278470
FN3 1042..1127 CDD:238020 24/123 (20%)
FReD 1133..1342 CDD:238040 79/218 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

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