DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and LOC594984

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001025596.1 Gene:LOC594984 / 594984 -ID:- Length:318 Species:Xenopus tropicalis


Alignment Length:203 Identity:75/203 - (36%)
Similarity:103/203 - (50%) Gaps:5/203 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 IDGKGGIYKLKIRELPAF-EAPCSSNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEK 218
            |.|...||:.....||.| :......||:..|:|.||:.:|.:.|..||.||||...||::|.|.
 Frog   119 ISGWYTIYRPNGLPLPVFCDMETDGGGWIVFQRRKDGSVDFFQEWDSYKRGFGRQDSEFWLGNEN 183

  Fly   219 VHLMTRQRRHELYIKLGKIDGTTSHAHYDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQKFT 283
            :||:|.....:|.:.|...|...:.|.|.||.:|||..:|.|...|...|.|||||..|:.::|:
 Frog   184 LHLLTATGNFQLRVDLMDFDSNRTFASYSNFRIGGESRNYTLSLGGFTGGDAGDSLSGHKNREFS 248

  Fly   284 TNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEGRSRNGKTNGILWGSWHNNDWTYSLTF 348
            :.|:|||:...:||....|.|||..|..|.|||.:.  |.......||:.|.|  ...:.||...
 Frog   249 SKDRDNDSSPTSCAERYKGAWWYSGCHTSNLNGLYL--GGKHGSFANGVNWKS--GGGYNYSYKV 309

  Fly   349 VEMMIRPR 356
            .||..||:
 Frog   310 SEMKFRPQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 72/196 (37%)
LOC594984NP_001025596.1 Collagen 42..99 CDD:189968
FReD 107..316 CDD:238040 73/200 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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