DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and fga

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001181918.1 Gene:fga / 378986 ZFINID:ZDB-GENE-031010-21 Length:684 Species:Danio rerio


Alignment Length:228 Identity:82/228 - (35%)
Similarity:122/228 - (53%) Gaps:38/228 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 GKGGIYKLKIRELPA-----FEAPCSSN----GWLTIQKRYDGAENFDRGWKDYKDGFGRV---- 208
            |:.|::|:|    ||     .|..|..:    ||..:|:|.||:.||:|.||:|.:|||::    
Zfish   465 GQSGMFKIK----PAGSEEVVEVYCDQSTGLGGWTLVQQREDGSVNFNRTWKEYLNGFGQIDKQG 525

  Fly   209 RGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFELGGEIESYELKSLGRYNGTAGDS 273
            :||.:||.:.:||:| |:...|.::|....|..::|.| |.::|.|.|.:.| :...|:|.|||:
Zfish   526 KGEIWIGNKFLHLLT-QKESLLRVELQDWTGAEAYAEY-NIKVGSEAEGFPL-TASDYDGDAGDA 587

  Fly   274 L---RP-------HERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEGRSRNGK 328
            |   .|       |...||:|.|:|:|.:..|||....|||||.:|..:.|||.:||.|:.....
Zfish   588 LVRGHPNLGSFLSHAGMKFSTFDRDSDKWEENCAEMYGGGWWYNNCQSANLNGIYYKGGQYDPAT 652

  Fly   329 ------TNGILWGSWHNNDWTYSLTFVEMMIRP 355
                  .||::|..:...|  |||..|.|.|||
Zfish   653 KVPYEIENGVVWLPFKPAD--YSLKVVRMKIRP 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 81/225 (36%)
fgaNP_001181918.1 Fib_alpha 45..186 CDD:462570
FReD 453..684 CDD:238040 82/228 (36%)
Blue background indicates that the domain is not in the aligned region.

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