DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and CG5550

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001246376.1 Gene:CG5550 / 36883 FlyBaseID:FBgn0034160 Length:250 Species:Drosophila melanogaster


Alignment Length:249 Identity:91/249 - (36%)
Similarity:128/249 - (51%) Gaps:27/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 AQAEIKSKDIQIQLSAAKIKQMSNELVTQCSRQDTCPIDGKGGIYKLKIRELPAFEAPC----SS 178
            |.||| .::::|| :..|......||..:           |.|:.|:::.. ...|..|    :.
  Fly    19 ASAEI-GENVKIQ-TYKKYSSSCKELNPK-----------KSGVQKIQVGS-DVIEVYCDVTIAG 69

  Fly   179 NGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSH 243
            .|||.:|:|....|||.|.|..|:.|||.::|.|||||..::.::..:..||||:|....|...:
  Fly    70 KGWLVVQRRVSVEENFYRNWTSYQTGFGDLKGNFFIGLNNLNKISSLQPQELYIELVDFAGEKRY 134

  Fly   244 AHYDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYD 308
            |||..|.:|....:|.:..||.|:|||||||..|..|.|:|.|:|||....||||...|.|||.:
  Fly   135 AHYSVFHVGNVYSNYPITQLGAYSGTAGDSLSYHLYQPFSTFDRDNDNATINCAARYMGAWWYRE 199

  Fly   309 CAK----SMLNGKFYKEGRSRNGKT--NGILWGSWHNNDWTYSLTFVEMMIRPR 356
            |..    |.|||. |..|...:...  :||:||.|  ..:|||...|.:|:||:
  Fly   200 CLSRIPCSNLNGA-YLGGNHTDPALFGSGIVWGEW--KGFTYSYKTVNIMVRPK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 80/205 (39%)
CG5550NP_001246376.1 FReD 34..250 CDD:238040 84/230 (37%)

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