DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6788 and Tnn

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_808507.2 Gene:Tnn / 329278 MGIID:2665790 Length:1560 Species:Mus musculus


Alignment Length:364 Identity:101/364 - (27%)
Similarity:166/364 - (45%) Gaps:56/364 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 SFDQNAD-----NPCSAHRIWVWRPILDRFAKVNSSDELKNQVNAMSETIKDLQTR---IGHKNE 85
            |.||::.     .|...:.|.||       |:..:.:..|....|::|.......|   :.|...
Mouse  1194 SKDQSSTILTGLKPGMEYTIHVW-------AQKGARESKKADTKALTEIDPPRNLRPFGVTHSGG 1251

  Fly    86 LLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSKDIQ------IQLSAAKIKQMSNELV 144
            :|.......:.....|.....|..|...|....|...:.:|::      :.|.|.|..|.|..:.
Mouse  1252 VLTWLPPSAQIDGYILTYQFPNGTVKEVELPRGQQRFELQDLEQGVTYPVSLVAFKGNQRSRTVS 1316

  Fly   145 T-------------QCS--RQDTCPIDGKGGIYKLKI-----RELPAF-EAPCSSNGWLTIQKRY 188
            |             .||  :|:|   :...|:|.:.:     |.:..: :......||:..|:|.
Mouse  1317 TTLSTVDARFPHPSDCSQVQQNT---NAASGLYTIYLNGDASRPMQVYCDMDTDGGGWIVFQRRN 1378

  Fly   189 DGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMT--RQRRHELYIKLGKIDGTTSHAHYDNFEL 251
            .|..:|.:.|:.|.:|||....||::||:|:|.:|  ...|:|:...|...: .:::|.||.|::
Mouse  1379 TGQLDFFKRWRSYVEGFGDPMKEFWLGLDKLHNLTTGTTTRYEVRADLQTFN-ESAYAVYDFFQV 1442

  Fly   252 GGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNG 316
            ....|.|:| |:|:|.|||||:|..|...||||.|:|||....|||...:|||||.:|..:..||
Mouse  1443 ASSKERYKL-SVGKYRGTAGDALTYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHLANPNG 1506

  Fly   317 KFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            |:   |.:::  :.|:.|..|..::  :|:.:||:.|||
Mouse  1507 KY---GETKH--SEGVNWEPWKGHE--FSIPYVELKIRP 1538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 71/204 (35%)
TnnNP_808507.2 EGF_2 <142..166 CDD:285248
EGF_2 169..197 CDD:285248
EB 181..233 CDD:279949
EGF_2 233..259 CDD:285248
fn3 264..332 CDD:278470
fn3 359..434 CDD:278470
fn3 444..521 CDD:278470
FN3 532..608 CDD:214495
FN3 620..696 CDD:214495
fn3 708..785 CDD:278470
fn3 796..875 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 868..888
fn3 884..961 CDD:278470
fn3 972..1049 CDD:278470
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1063
FN3 1060..1136 CDD:214495
fn3 1148..1225 CDD:278470 8/37 (22%)
fn3 1236..1313 CDD:278470 13/76 (17%)
FReD 1327..1539 CDD:238040 75/224 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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