DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and CG1889

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_727376.2 Gene:CG1889 / 31928 FlyBaseID:FBgn0030164 Length:338 Species:Drosophila melanogaster


Alignment Length:322 Identity:104/322 - (32%)
Similarity:154/322 - (47%) Gaps:51/322 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VNSSDELKNQVNAMSETIKDLQTRIGHKNELL--LLQAGQIKDQSARLNVLIKNMKVLRSECLNA 118
            |::...|..::.:::..|..::.:||...|.|  |.:||              :..|:.....||
  Fly    44 VSALSGLTTRMQSLNNEIASVKEQIGSLQEQLVDLRRAG--------------SAPVVGLASPNA 94

  Fly   119 QA-----EIKSKDIQIQL----SAAKIKQMSNELVT--QCSRQDTCPIDGKGGIYKLKIR-ELPA 171
            .|     ...|.||:.||    .||.:.      :|  .|.:|       :.|:.:::.| .:..
  Fly    95 LASRFPFSHNSLDIEPQLLANGGAAAVP------ITPANCLKQ-------QHGVVRIRPRSNVEP 146

  Fly   172 FEAPCS----SNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYI 232
            |...|.    :.||..:..||||:|:|:|.|.|||.|||.:..||||||:|:|.:|....:||.:
  Fly   147 FFVFCDQKVRNGGWTMVVNRYDGSEDFNRKWADYKIGFGPLTTEFFIGLDKLHQITSSDNYELLV 211

  Fly   233 KLGKIDGTTSHAHYDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCA 297
            :|........:|.||:|.:|.|.|.|.|..||.|:|.|.|:||.|..:||:|:|:.||....|||
  Fly   212 QLQNRKQELRYALYDHFSIGSESEQYRLNVLGDYHGDAADALRDHTGKKFSTHDRVNDENEQNCA 276

  Fly   298 ADEYGGWWYYDCAKSMLNGKF--YKEGRSRN-GKTNGILWGSWHNNDWTYSLTFVEMMIRPR 356
            |.:.|.:||.....  |...|  |:....|: ....||||..:.|.. ..||..|.||:|||
  Fly   277 AQQSGAFWYGGSCN--LTNPFGLYQRLLERDVDGFKGILWRGFLNGP-KGSLKIVRMMVRPR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 78/203 (38%)
CG1889NP_727376.2 FReD 123..335 CDD:238040 81/221 (37%)

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