DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6788 and Angptl3

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_038941.1 Gene:Angptl3 / 30924 MGIID:1353627 Length:455 Species:Mus musculus


Alignment Length:352 Identity:91/352 - (25%)
Similarity:162/352 - (46%) Gaps:63/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SDELKN---QVNAMSETIKDLQTRIGHK--------NELLLLQAGQ------------IKDQSAR 100
            ::|:||   ::|:..|::.:.:|.:.||        ..|:|..||.            ::.|...
Mouse   110 NEEVKNMSVELNSKLESLLEEKTALQHKVRALEEQLTNLILSPAGAQEHPEVTSLKSFVEQQDNS 174

  Fly   101 LNVLIKNMKVLRSECLNAQAEIKSKDIQIQLSAAKIKQMSNELVTQCSR---------------- 149
            :..|:::::....:.  :|..::.|:|:.||....|::.|...::..||                
Mouse   175 IRELLQSVEEQYKQL--SQQHMQIKEIEKQLRKTGIQEPSENSLSSKSRAPRTTPPLQLNETENT 237

  Fly   150 -QDTCPID-----GKG----GIYKLKIRELPAFEAPC---SSNGWLTIQKRYDGAENFDRGWKDY 201
             ||..|.|     .:|    |:|.:|.|....|...|   |.:.|..||.|.||:::|:..|::|
Mouse   238 EQDDLPADCSAVYNRGEHTSGVYTIKPRNSQGFNVYCDTQSGSPWTLIQHRKDGSQDFNETWENY 302

  Fly   202 KDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFELGGEIESYELKSLGRY 266
            :.||||:.|||::||||::.:.:|..:.|.::|.....:..:..| :|.||....:|.| .:...
Mouse   303 EKGFGRLDGEFWLGLEKIYAIVQQSNYILRLELQDWKDSKHYVEY-SFHLGSHETNYTL-HVAEI 365

  Fly   267 NGTAGDSLRPHERQKFTT-NDKDNDAYRFNCAADEYGGWWYYD-CAKSMLNGKFYK-EGRSRNGK 328
            .|....:|..|....|:| |.:...  :..|.....||||:.| |.::.||||:.| ..:||..:
Mouse   366 AGNIPGALPEHTDLMFSTWNHRAKG--QLYCPESYSGGWWWNDICGENNLNGKYNKPRTKSRPER 428

  Fly   329 TNGILWGSWHNNDWTYSLTFVEMMIRP 355
            ..||.|......  .|::...:||::|
Mouse   429 RRGIYWRPQSRK--LYAIKSSKMMLQP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 63/202 (31%)
Angptl3NP_038941.1 Sufficient to inhibit LIPG/EL phospholipase activity. /evidence=ECO:0000250|UniProtKB:Q9Y5C1 17..207 19/98 (19%)
Sufficient to inhibit LPL lipase activity. /evidence=ECO:0000250|UniProtKB:Q9Y5C1, ECO:0000269|PubMed:20581395 17..165 12/54 (22%)
Required for inhibition of LPL lipase activity. /evidence=ECO:0000250|UniProtKB:Q9Y5C1 32..56
SPEC <34..191 CDD:295325 14/82 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..242 8/39 (21%)
FReD 241..453 CDD:238040 65/217 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.