DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and tncb

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001299845.1 Gene:tncb / 30037 ZFINID:ZDB-GENE-980526-104 Length:1811 Species:Danio rerio


Alignment Length:365 Identity:92/365 - (25%)
Similarity:144/365 - (39%) Gaps:76/365 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SLSISTSLANDPQRSFDQNADNPCSAHRIWVWRP----ILDRFAKVNSSDEL------------- 62
            |.:.||....|.....:..|.|..:...:..|:|    |........|:|.:             
Zfish  1486 SAATSTDFTTDVDAPQNLAASNIQTETAMLTWKPPRADISGYILSFESADGVVKEVVLSPTATFY 1550

  Fly    63 -KNQVNAMSETIKDLQTRIGHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSKD 126
             .:|:.|.:|....||...|.|...:      |......:.||.|:.|......||.        
Zfish  1551 SMSQLTASTEYTVKLQAIAGPKRSRV------ISTVFLTIGVLYKHPKDCSQALLNG-------- 1601

  Fly   127 IQIQLSAAKIKQMSNELVTQCSRQDTCPIDGKGGIYKLKIR--ELPAFEAPC----SSNGWLTIQ 185
                                         |...|:|.:.:|  |....:..|    ...||:...
Zfish  1602 -----------------------------DTTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFV 1637

  Fly   186 KRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFE 250
            :|..|...|.|.||:|..|||.:..||::||..:|.:|...::||.:.| :..|.:::|.||.|.
Zfish  1638 RRQSGKVEFFRNWKNYTAGFGDLNDEFWLGLSNLHKITSFGQYELRVDL-RDKGESAYAQYDKFS 1701

  Fly   251 LGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLN 315
            :......|:: .:|.|:||||||:..|..:.|:|.|.|||....|||....|.:||.:|.:..:.
Zfish  1702 ISEPRARYKV-HVGGYSGTAGDSMTYHHGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNIM 1765

  Fly   316 GKFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            |::     ..|..:.|:.|..|..::  :|:.|.||.|||
Zfish  1766 GRY-----GDNSHSKGVNWFHWKGHE--HSVEFAEMKIRP 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 66/202 (33%)
tncbNP_001299845.1 DnaJ <471..>544 CDD:333066
fn3 689..760 CDD:306538
fn3 778..858 CDD:306538
fn3 868..948 CDD:306538
FN3 958..1047 CDD:238020
fn3 1050..1128 CDD:306538
fn3 1140..1215 CDD:306538
fn3 1231..1303 CDD:306538
fn3 1323..1400 CDD:306538
fn3 1410..1482 CDD:306538
fn3 1498..1570 CDD:306538 12/71 (17%)
FReD 1589..1798 CDD:238040 69/254 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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