DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Mfap4

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_006246622.1 Gene:Mfap4 / 287382 RGDID:1307841 Length:281 Species:Rattus norvegicus


Alignment Length:216 Identity:77/216 - (35%)
Similarity:108/216 - (50%) Gaps:34/216 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 LPAFEAPCSSNG-WLTIQKRYDGAENFDRGWKDYKDGFGRVRGEF-------------------- 212
            :|.|....:..| |...|||::|:.:|.|||.|||.||||..||:                    
  Rat    68 VPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGKVGSWGGGCPLANSWLT 132

  Fly   213 ----FIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFEL-----GGEIESYELKSLGRYNG 268
                ::||:.:||:|.::::||.:.|...:..|::|.|.:|.:     ..|.:.|.|...|..:|
  Rat   133 SCHPYLGLQNLHLLTLKQKYELRVDLEDFENNTAYAKYVDFSISPNAVSAEEDGYTLYVAGFEDG 197

  Fly   269 TAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEGRSRNGKTNGIL 333
            .|||||..|..|||:|.|:|.|.:..||||...|.:|:..|..:.||| ||. |.|.....|||.
  Rat   198 GAGDSLSYHSGQKFSTFDRDQDLFVQNCAALSSGAFWFRSCHFANLNG-FYL-GGSHLSYANGIN 260

  Fly   334 WGSWHNNDWTYSLTFVEMMIR 354
            |..|  ..:.|||...||.||
  Rat   261 WAQW--KGFYYSLKRTEMKIR 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 77/216 (36%)
Mfap4XP_006246622.1 FReD 38..280 CDD:238040 77/216 (36%)

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