DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Tnr

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_037177.2 Gene:Tnr / 25567 RGDID:3886 Length:1358 Species:Rattus norvegicus


Alignment Length:336 Identity:99/336 - (29%)
Similarity:161/336 - (47%) Gaps:58/336 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ILDRFAKVNSSDELKNQV--------NAMSETIKDLQTRIGHKNELLLLQAGQIKDQSARLNVLI 105
            :||..|.:.:|:..:...        .|:...:...::..|.:.||::    ..:|...||..|.
  Rat  1040 LLDPPANLTASEVTRQSALISWQPPRAAIENYVLTYKSTDGSRKELIV----DAEDTWIRLEGLS 1100

  Fly   106 KNMKVLRSECLNAQAEIKSKDIQIQLSAAK---IKQMSNELVTQCSRQDTCPI---------DGK 158
            :|                 .|..:.|.||:   ...:::.:.|...|..:.|.         |..
  Rat  1101 EN-----------------TDYTVLLQAAQEATRSSLTSTIFTTGGRVFSHPQDCAQHLMNGDTL 1148

  Fly   159 GGIYKLKI-----RELPAF-EAPCSSNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLE 217
            .|:|.:.:     .:|..: :......||:..|:|.:|..:|.|.|.||:.|||.:..||::||:
  Rat  1149 SGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNLEDEFWLGLD 1213

  Fly   218 KVHLMTRQRRHELYIKLGKIDGTTS-HAHYDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQK 281
            .:|.:|.|.|:||.:.:.  ||..: .|:||.|.:......|:|: :|.|||||||||..|:.:.
  Rat  1214 NIHRITAQGRYELRVDMR--DGQEAVFAYYDKFAVEDSRSLYKLR-IGGYNGTAGDSLSYHQGRP 1275

  Fly   282 FTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEGRSRNGKTNGILWGSWHNNDWTYSL 346
            |:|.|:|||....|||....|.|||.:|.::.||||:   |.||:  :.||.|..|..::  :|:
  Rat  1276 FSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKY---GESRH--SQGINWYHWKGHE--FSI 1333

  Fly   347 TFVEMMIRPRI 357
            .||||.:||.|
  Rat  1334 PFVEMKMRPYI 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 76/202 (38%)
TnrNP_037177.2 EGF_Tenascin 203..231 CDD:376143
C_rich_MXAN6577 207..317 CDD:469225
EGF_Tenascin 235..261 CDD:480934
FN3 355..934 CDD:442628
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020 16/105 (15%)
FReD 1134..1342 CDD:238040 77/217 (35%)
Blue background indicates that the domain is not in the aligned region.

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