DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Fgg

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_006232587.1 Gene:Fgg / 24367 RGDID:2613 Length:445 Species:Rattus norvegicus


Alignment Length:425 Identity:114/425 - (26%)
Similarity:174/425 - (40%) Gaps:102/425 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YLILILSLSISTSLANDPQRSFDQNADNPCSAHRIWVWRPILD-RFAK-----------VNS-SD 60
            :.:|:||   .|.||     .:....||.|          ||| ||..           :|| ..
  Rat    14 WALLLLS---PTGLA-----QYTATRDNCC----------ILDERFGSYCPTTCGISDFLNSYQT 60

  Fly    61 ELKNQVNAMSETIKDLQTRIGHKNELLLL-----------QAGQIKDQSARLNVLIKNMKVLRSE 114
            ::...:..:...::..:.|.....||:..           :.|.|:..:.:...:::  ::|:.|
  Rat    61 DVDTDLQTLENILQRAENRTTEAKELIKAIQVYYNPDQPPKPGMIEGATQKSKKMVE--EILKYE 123

  Fly   115 CLNAQAEIKSKDIQIQLSAAK-----IKQMSNELVTQCSRQDTC---------------PIDGKG 159
            .|....|...:.:|...::.|     :||...:|..||  |:.|               .|..||
  Rat   124 ALLLTHESSIRYLQDIYTSNKQKITNLKQKVAQLEAQC--QEPCKDSVRIHDTTGKDCQDIANKG 186

  Fly   160 ----GIYKLK-IRELPAFEAPC----SSNGWLTIQKRYDGAENFDRGWKDYKDGFGRV----RGE 211
                |:|.:: ::....|...|    |.|||..:|||.||:.:|.:.|..||:|||.:    ..|
  Rat   187 AKESGLYFIRPLKATQQFLVYCEIDGSGNGWTVLQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTE 251

  Fly   212 FFIGLEKVHLMTRQRR--HELYIKLGKIDGTTSHAHYDNFELGGEIESYELKSLGRYNGTAGDS- 273
            |::|.||:||::.|..  :.|.|:|....|.||.|.|..|.:|.|.:.|.|.......|.|||: 
  Rat   252 FWLGNEKIHLISMQSTIPYALRIQLKDWSGRTSTADYAMFRVGPESDKYRLTYAYFIGGDAGDAF 316

  Fly   274 -------------LRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNGKFYKEG--- 322
                         ...|....|:|.|.|||.:..|||..:..|||...|....|||.:|:.|   
  Rat   317 DGYDFGDDPSDKFFTSHNGMHFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYS 381

  Fly   323 --RSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
              .:.||..|||:|.:|... | ||:....|.|.|
  Rat   382 KSSTPNGYDNGIIWATWKTR-W-YSMKETTMKIIP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 77/226 (34%)
FggXP_006232587.1 Fib_alpha 30..172 CDD:462570 28/155 (18%)
Fibrinogen_C 175..414 CDD:395095 79/240 (33%)

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