DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6788 and Fgb

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_064456.2 Gene:Fgb / 24366 RGDID:2604 Length:479 Species:Rattus norvegicus


Alignment Length:379 Identity:103/379 - (27%)
Similarity:168/379 - (44%) Gaps:83/379 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RPILDRFAKVNSSDELKNQVNAMSET----------IKDL----QTRIGHKNELLLLQAGQIKDQ 97
            |||.:..|::||:      :|::|||          :||:    |.::.....::...:..::||
  Rat   109 RPIKNSIAELNSN------INSVSETSSVTFQYLTLLKDMWKKKQAQVKDNENVINEYSSILEDQ 167

  Fly    98 SARLNVLIK-----NMKVLRS--ECLNAQAEIKSKDIQIQLSAAKIKQMSNELVTQCSRQDTCPI 155
            ...::..:.     |::||||  |.|.::.:....||..|..........|..:...|.::...|
  Rat   168 KLYIDETVNDNIPLNLRVLRSILEDLRSKIQKLESDISAQTEYCHTPCTVNCNIPVVSGKECEEI 232

  Fly   156 DGKGGIYKLKIRELPAFEAPCSS-------------NGWLTIQKRYDGAENFDRGWKDYKDGFGR 207
            ..|||    :..|:...:...||             .||..||.|.||:.:|.|.|..||.|||.
  Rat   233 IRKGG----ETSEMYLIQPDTSSKPYRVYCDMKTENGGWTVIQNRQDGSVDFGRKWDPYKKGFGN 293

  Fly   208 VR------------GEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFELGGEIESYEL 260
            :.            ||:::|.:|:..:||....||.|::....|....|||..|.:..|...|::
  Rat   294 IATNEDTKKYCGLPGEYWLGNDKISQLTRIGPTELLIEMEDWKGDKVKAHYGGFTVQTEANKYQV 358

  Fly   261 KSLGRYNGTAGDSLRP--------------HERQKFTTNDKDNDAY-----RFNCAADEYGGWWY 306
             |:.:|.||||::|..              |....|:|.|:|||.:     |..|:.::.|||||
  Rat   359 -SVNKYKGTAGNALMEGASQLVGENRTMTIHNGMFFSTYDRDNDGWVTTDPRKQCSKEDGGGWWY 422

  Fly   307 YDCAKSMLNGKFYKEG-----RSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            ..|..:..||::|..|     .|::|..:|::|.:| ...| ||:..:.|.|||
  Rat   423 NRCHAANPNGRYYWGGLYSWDMSKHGTDDGVVWMNW-KGSW-YSMRRMSMKIRP 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 73/245 (30%)
FgbNP_064456.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..82
Beta-chain polymerization, binding distal domain of another fibrin. /evidence=ECO:0000250 33..35
Fib_alpha 79..222 CDD:462570 26/118 (22%)
Fibrinogen_C 225..474 CDD:395095 75/255 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.