DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Tnr

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_071707.2 Gene:Tnr / 21960 MGIID:99516 Length:1358 Species:Mus musculus


Alignment Length:366 Identity:108/366 - (29%)
Similarity:170/366 - (46%) Gaps:70/366 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ILSLSISTSLAN--DPQRSFDQNADNPCSAHRIWVWRPILDRFAKVNSSDELKNQVNAMSETIKD 75
            ::|.:|:|:.:.  ||..:...:.....||  :..|:|  .|.|       ::|.|.....|   
Mouse  1028 LMSGTIATNFSTLLDPPDNLTASEVTRQSA--LISWQP--PRAA-------IENYVLTYKST--- 1078

  Fly    76 LQTRIGHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAEIKSKDIQIQLSAAKIKQMS 140
                .|.:.||::    ..:|...||..|.:|                 .|..:.|.||:....|
Mouse  1079 ----DGSRKELIV----DAEDTWIRLEGLSEN-----------------TDYTVLLQAAQEATRS 1118

  Fly   141 NELVT------------QCSRQDTCPIDGKGGIYKLKI-----RELPAF-EAPCSSNGWLTIQKR 187
            :...|            |...|.....|...|:|.:.:     .:|..: :......||:..|:|
Mouse  1119 SLTSTVFTTGGRVFSHPQDCAQHLMNGDTLSGVYTIFLNGELSHKLQVYCDMTTDGGGWIVFQRR 1183

  Fly   188 YDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTS-HAHYDNFEL 251
            .:|..:|.|.|.||:.|||.:..||::||:.:|.:|.|.|:||.:.:.  ||..: .|:||.|.:
Mouse  1184 QNGQTDFFRKWADYRVGFGNLEDEFWLGLDNIHRITAQGRYELRVDMR--DGQEAVFAYYDKFAV 1246

  Fly   252 GGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSMLNG 316
            ......|::: :|.|||||||||..|:.:.|:|.|:|||....|||....|.|||.:|.::.|||
Mouse  1247 EDSRSLYKIR-IGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNG 1310

  Fly   317 KFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRPRI 357
            |:   |.||:  :.||.|..|..::  :|:.||||.:||.|
Mouse  1311 KY---GESRH--SQGINWYHWKGHE--FSIPFVEMKMRPYI 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 75/202 (37%)
TnrNP_071707.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 37..58
EGF_Tenascin 203..231 CDD:376143
C_rich_MXAN6577 207..317 CDD:469225
EGF_Tenascin 235..261 CDD:480934
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..586 CDD:394996
FN3 <566..>756 CDD:442628
fn3 776..855 CDD:394996
fn3 865..944 CDD:394996
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020 25/123 (20%)
FBG 1134..1343 CDD:214548 78/218 (36%)
Blue background indicates that the domain is not in the aligned region.

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