DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Tnc

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:NP_001356140.1 Gene:Tnc / 21923 MGIID:101922 Length:2110 Species:Mus musculus


Alignment Length:370 Identity:103/370 - (27%)
Similarity:157/370 - (42%) Gaps:63/370 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TAYLILIL-------SLSISTSLANDPQRSFDQNADNPCSAHRIWVWRP----ILDRFAKVNSSD 60
            |.|::.|.       |.:|:|....|.....:..|....|...:..|||    :........|.|
Mouse  1770 TEYILSIFAEKGQQKSSTIATKFTTDLDSPREFTATEVQSETALLTWRPPRASVTGYLLVYESVD 1834

  Fly    61 ELKNQV----NAMSETIKDLQTRIGHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQAE 121
            ....:|    :..|.::.||.....:               |||:..|              ...
Mouse  1835 GTVKEVIVGPDTTSYSLADLSPSTHY---------------SARIQAL--------------SGS 1870

  Fly   122 IKSKDIQIQLSAAKIKQMSNELVTQCSRQDTCPIDGKGGIYKLKIR--ELPAFEAPC----SSNG 180
            ::||.||...:...:..   .....|| |.....|...|:|.:.|.  :..|.|..|    ...|
Mouse  1871 LRSKLIQTIFTTIGLLY---PFPRDCS-QAMLNGDTTSGLYTIYINGDKTQALEVYCDMTSDGGG 1931

  Fly   181 WLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAH 245
            |:...:|.:|.|:|.|.||.|..|||..|.||::||:.:..:|.|.::||.:.| :..|.:::|.
Mouse  1932 WIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDL-QDHGESAYAV 1995

  Fly   246 YDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCA 310
            ||.|.:|.....|:||..| |:||||||:..|..:.|:|.|||.|:...|||....|.:||.:|.
Mouse  1996 YDRFSVGDAKSRYKLKVEG-YSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAFWYKNCH 2059

  Fly   311 KSMLNGKFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            :..|.|::     ..|..:.|:.|..|..::  ||:.|.||.:||
Mouse  2060 RVNLMGRY-----GDNNHSQGVNWFHWKGHE--YSIQFAEMKLRP 2097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 73/202 (36%)
TncNP_001356140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..91
EGF_2 222..247 CDD:285248
EGF_2 345..372 CDD:285248
EGF_2 377..403 CDD:285248
EGF_2 408..434 CDD:285248
EGF_2 468..496 CDD:285248
EGF_2 504..527 CDD:285248
EGF_2 533..558 CDD:285248
EGF_2 592..620 CDD:285248
FN3 624..710 CDD:238020
fn3 713..793 CDD:333790
FN3 804..891 CDD:238020
fn3 894..976 CDD:333790
fn3 986..1064 CDD:333790
fn3 1075..1147 CDD:333790
fn3 1169..1246 CDD:333790
fn3 1257..1336 CDD:333790
fn3 1348..1417 CDD:333790
fn3 1442..1519 CDD:333790
fn3 1530..1610 CDD:333790
fn3 1620..1699 CDD:333790
fn3 1711..1785 CDD:333790 3/14 (21%)
fn3 1797..1869 CDD:333790 15/100 (15%)
Fibrinogen_C 1889..2098 CDD:278572 77/219 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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