DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and Fcnb

DIOPT Version :10

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_006497739.1 Gene:Fcnb / 14134 MGIID:1341158 Length:322 Species:Mus musculus


Alignment Length:120 Identity:42/120 - (35%)
Similarity:58/120 - (48%) Gaps:21/120 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 CPIDGKGGIYKLKIRELPAFEAPCSSNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLE 217
            |.:|..||                   ||...|:|.||:.:|.|.|..||.|||...|||::|.:
Mouse   134 CDMDTDGG-------------------GWTVFQRRLDGSVDFFRDWTSYKRGFGSQLGEFWLGND 179

  Fly   218 KVHLMTRQRRHELYIKLGKIDGTTSHAHYDNFELGGEIESYELKSLGRY-NGTAG 271
            .:|.:|.|...||.:.|...:|....|.|.:|::.||.|.|:| .||.: .|.||
Mouse   180 NIHALTTQGTSELRVDLSDFEGKHDFAKYSSFQIQGEAEKYKL-ILGNFLGGGAG 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 39/113 (35%)
FcnbXP_006497739.1 Collagen 40..95 CDD:460189
FReD 103..>238 CDD:238040 42/120 (35%)
Blue background indicates that the domain is not in the aligned region.

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