DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and tnxba

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_021322558.1 Gene:tnxba / 100536295 ZFINID:ZDB-GENE-070103-5 Length:2285 Species:Danio rerio


Alignment Length:433 Identity:114/433 - (26%)
Similarity:175/433 - (40%) Gaps:99/433 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TAYLILILSL-------SISTSLANDPQRSFDQNADNPCSAHRIWVWRPILDRFAKVNS------ 58
            |.|.|.:.|:       .:..|:...|....:....|......:.||:|   ..|||:|      
Zfish  1853 TTYDITVSSVLDKLESEPVIASITTVPDSPTELKVVNITDTKALLVWKP---SKAKVDSYILSYG 1914

  Fly    59 ---SDELKNQVNAMSETIKDLQTRIGHKNELLLL----QAGQIKDQS----------ARLNVLIK 106
               |..:...|.....:::. |.|..|::.|.::    |..:::..|          .:|.|:..
Zfish  1915 TTKSPNVTITVTLSGSSVEH-QLRALHRSSLYMVKMTSQVNRLQSSSVSTSFTTGSGVKLQVVTP 1978

  Fly   107 NMKVLRSECLNAQA---EIKSKDIQIQLSAAKIKQMSNELVTQ-------CSRQDTCPIDG-KGG 160
            :.....|..::.:|   ..||..:..|||....:.:.|..||.       .....|..||| :.|
Zfish  1979 DEVTFHSAVISWKAPRVAFKSYRLTYQLSEEVKELILNPSVTHYELTGLAAFSNYTVKIDGERDG 2043

  Fly   161 IY------KLKIRELP-AFEAPCS-------------------SNG---------------WLTI 184
            .|      .....:|| .:...||                   .||               |...
Zfish  2044 QYISFVSSDFTTAQLPHPYPTDCSEVQINGMKESGEAEIYPEGKNGEPVRVYCDMETDGGAWTVF 2108

  Fly   185 QKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTSHAHYDNF 249
            |:|.||:.:|.|.|:||..|||.:.|||::|.:.:|.:|..:...|.|.| :....|:.|.|.||
Zfish  2109 QRRMDGSTDFFRSWRDYSKGFGLLSGEFWLGNDVLHTLTSLKAMSLRIDL-RSGNDTAFAQYINF 2172

  Fly   250 ELGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWYYDCAKSML 314
            .:..|...|.: .|..|:||||||::.|:.:.|:|.|||.|....:||....|||||.:|.|:.|
Zfish  2173 NISSEANHYAI-DLSGYSGTAGDSMKYHKGRPFSTKDKDPDTLSIHCAKAYMGGWWYKNCYKANL 2236

  Fly   315 NGKF--YKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRP 355
            ||.:  |.:.:       |::|..|...|  .||.|.||.:||
Zfish  2237 NGLYASYSDNK-------GVVWIDWKGKD--ASLPFTEMKLRP 2270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 76/239 (32%)
tnxbaXP_021322558.1 COG3942 596..>913 CDD:332523
EGF_2 1380..1406 CDD:285248
fn3 1792..1870 CDD:306538 4/16 (25%)
fn3 1880..1952 CDD:306538 14/75 (19%)
fn3 1976..2037 CDD:306538 11/60 (18%)
FReD 2061..2270 CDD:238040 70/219 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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