DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6788 and tnn

DIOPT Version :9

Sequence 1:NP_573254.1 Gene:CG6788 / 32773 FlyBaseID:FBgn0030880 Length:358 Species:Drosophila melanogaster
Sequence 2:XP_017949080.2 Gene:tnn / 100491528 XenbaseID:XB-GENE-998034 Length:1109 Species:Xenopus tropicalis


Alignment Length:376 Identity:102/376 - (27%)
Similarity:162/376 - (43%) Gaps:72/376 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TAYLILI----LSLSISTSLANDPQ-----RSFDQNADNPCSAHRIWVWRP--------ILDRFA 54
            |.||:..    .|..::||...|..     :|||..     .......|.|        ||....
 Frog   779 TVYLLAYRGDRRSRQVTTSFYTDIDPPTNLQSFDVT-----QTEASLTWTPPRAKIDGYILTYTD 838

  Fly    55 KVNSSDELKNQVNAMSETIKDLQTRIGHKNELLLLQAGQIKDQSARLNVLIKNMKVLRSECLNAQ 119
            ...|::|::...::.|..:|:|:..:.:...|...:......|::.:...:..:....|:|    
 Frog   839 ADGSTEEIQLDSSSKSFAMKNLKKGLKYTVYLTAFKGDSRSSQASTIFSTVAFIITHPSDC---- 899

  Fly   120 AEIKSKDIQIQLSAAKIKQMSNELVTQCSRQDT-------CPIDGKGGIYKLKIRELPAFEAPCS 177
                   ||||||..:    .:.:.|.....||       |..:..||                 
 Frog   900 -------IQIQLSGNR----QSGVYTIYPGGDTAKGVRVYCDQETDGG----------------- 936

  Fly   178 SNGWLTIQKRYDGAENFDRGWKDYKDGFGRVRGEFFIGLEKVHLMTRQRRHELYIKLGKIDGTTS 242
              ||:..|:|..|..:|.:.|:.|.:|||....||::|||.:|.:|....:...|::....|..|
 Frog   937 --GWIVFQRRNSGKLDFYQRWRTYVEGFGDPSDEFWLGLEWIHKLTSSPGNNYEIRVDLRAGDES 999

  Fly   243 -HAHYDNFELGGEIESYELKSLGRYNGTAGDSLRPHERQKFTTNDKDNDAYRFNCAADEYGGWWY 306
             :|.|.||.:|...:.|:| |:..|:|||||.|..|...||:|.|||||....|||....|.:||
 Frog  1000 VYAFYRNFRVGSSKDRYKL-SISDYSGTAGDGLTYHNGWKFSTWDKDNDIALTNCALSHRGAFWY 1063

  Fly   307 YDCAKSMLNGKFYKEGRSRNGKTNGILWGSWHNNDWTYSLTFVEMMIRPRI 357
            .:|..:.|||::.:.|.|:     |:.|..|..::  :|:.||||.:||.:
 Frog  1064 KNCHLANLNGQYGETGHSQ-----GVNWEPWKGHE--FSVPFVEMKMRPNL 1107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6788NP_573254.1 FReD 160..356 CDD:238040 67/196 (34%)
tnnXP_017949080.2 exchanger_TraA <124..432 CDD:411343
fn3 449..513 CDD:394996
fn3 543..619 CDD:394996
fn3 630..707 CDD:394996
fn3 716..788 CDD:394996 3/8 (38%)
fn3 803..879 CDD:394996 13/80 (16%)
FReD 895..1105 CDD:238040 79/251 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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