DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnb and clk2a

DIOPT Version :9

Sequence 1:NP_728107.2 Gene:mnb / 32771 FlyBaseID:FBgn0259168 Length:1047 Species:Drosophila melanogaster
Sequence 2:NP_001038344.1 Gene:clk2a / 558981 ZFINID:ZDB-GENE-030131-298 Length:526 Species:Danio rerio


Alignment Length:561 Identity:156/561 - (27%)
Similarity:249/561 - (44%) Gaps:100/561 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 DEDGDRDRDRVDGNVLMVQGS---SSSSSRMKAERALYYTMSAYGSSGGSVDAAQGSGSGGGRQR 183
            |...:|||||..|.....:.|   ||||.|.:..|       .:....|...:.........|:.
Zfish    20 DRYRERDRDRDRGRKPRHRRSPTYSSSSERERRAR-------GHRQDTGYARSRSYDNRSSDRRP 77

  Fly   184 HAPLYGRFVDAEDLPATH-----RDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRKLSVDL 243
            :...||......|    |     ||....|.:||             |::...||.     |.|.
Zfish    78 YDRHYGESYRRLD----HSRERDRDQNRDHRTPS-------------NYYSRDASP-----SYDF 120

  Fly   244 IKTYKHINEVYYAKK------KRRAQQTQGDDDSSNKKE---RKLYNDGYDDDNHDYIIKNGEKF 299
            .:......|..|.:|      |||.::|:....||::.:   |.|.  ..||:....|.::|:..
Zfish   121 RRGRDRDREDSYRRKGSRRKHKRRRRRTRSYSASSSRSDSGTRALC--VRDDEEGHLICRSGDVL 183

  Fly   300 LDRYEIDSLIGKGSFGQVVKAYDHEE-QCHVAIKIIKNKKPFLNQAQIEVKLLEMMNRADAENKY 363
            .:||||.|.:|:|:||:|::..||.. ..|||:|||||.:.:...|::|:.:||.:|..|.||..
Zfish   184 QERYEIVSTLGEGTFGRVMQCIDHRRGGAHVALKIIKNVEKYKEAARLEINVLERINEKDPENNN 248

  Fly   364 YIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLSTPELNII 428
            ..|::...|.:..|:|:.||||:.:.:|.|:..|:...|:|..|..|.|:|.|:.||.  |..:.
Zfish   249 LCVQMFDWFDYHGHMCISFELLALSTFDFLKENNYLPYSINQVRHMAYQVCLAVKFLH--ENKLT 311

  Fly   429 HCDLKPENILLCNP-----------------KRSAIKIVDFGSSCQLGQRIYHYIQSRFYRSPEV 476
            |.||||||||..|.                 |.:|:::|||||:....:.....:.:|.||:|||
Zfish   312 HTDLKPENILFVNSDYTVTYNVEKKRDERTVKNTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEV 376

  Fly   477 LLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLGMPPKYLLDQAHKTRKFF-- 539
            :|.:.:....|:||:|.||.|.:.|..||...:..:.:..:..:||..|..::.:..|.:.|:  
Zfish   377 ILELGWSQPCDVWSIGSILFEYYLGFTLFQTHDNREHLAMMERILGPVPSRMIRKTRKQKYFYRG 441

  Fly   540 ----DKIVADGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLDEPGHSVSDYLKFKDLI 600
                |:..:.|.||.:..:..|:|....:.:.|.:.                          |||
Zfish   442 RLDWDENSSAGRYVRENCKPLRRYLLSEAEEHHQLF--------------------------DLI 480

  Fly   601 LRMLDFDPKTRVTPYYALQHNFFKRTADEATNTSGAGATAN 641
            ..||:::|..|:|...||:|.||:.....:..::|....||
Zfish   481 EAMLEYEPSKRLTLAAALRHPFFQSGISSSELSAGKSWEAN 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mnbNP_728107.2 PKc_DYRK1 289..628 CDD:271128 110/362 (30%)
S_TKc 303..623 CDD:214567 105/343 (31%)
clk2aNP_001038344.1 DUF1777 34..>117 CDD:285811 21/111 (19%)
PRP38_assoc <37..104 CDD:289628 15/77 (19%)
PKc_CLK2 174..503 CDD:271117 108/356 (30%)
S_TKc 187..503 CDD:214567 105/343 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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