DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mnb and Clk2

DIOPT Version :9

Sequence 1:NP_728107.2 Gene:mnb / 32771 FlyBaseID:FBgn0259168 Length:1047 Species:Drosophila melanogaster
Sequence 2:XP_008759408.1 Gene:Clk2 / 365842 RGDID:1359711 Length:540 Species:Rattus norvegicus


Alignment Length:650 Identity:161/650 - (24%)
Similarity:261/650 - (40%) Gaps:179/650 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GSFSSSIITSSSSSLN----H-------HPHNGHHN--------HHHPPHYINYLAQIGCQHRVR 80
            |:.|.:::|.....|.    |       ||...|.:        |.|      |.::...:.|.|
  Rat     8 GNISHTLVTCRELWLRPEGLHGAMFEMPHPRRYHSSERGSRGSYHEH------YRSRKHKRRRSR 66

  Fly    81 NWPTNGNQDQADDDDAGHQIISKFLPKSAWDTVLLDVKRDVDEDGDRDRDRVDGNVLMVQGSSSS 145
            :|.:..::                            .:|...||....|.| .|.:|    |:||
  Rat    67 SWSSTSDR----------------------------TRRRRREDSYHVRSR-SGYLL----SNSS 98

  Fly   146 SSRMKAERALY-------YTMSAYGSSGGSVDAAQGSGSGGGRQRHAPLYGRFVDAEDLPATHRD 203
            .....::|.||       |..:.|....|  :|...:..     ||:..|            ||:
  Rat    99 YDDHSSDRRLYDRRYCGSYRRNDYSRDRG--EAYYDTDF-----RHSYEY------------HRE 144

  Fly   204 VMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRKLSVDLIKTYKHINEVYYAKKKRRAQQTQGD 268
            ...:.|..||.              |:|                         :::||..:|...
  Rat   145 NSSYRSQRSSR--------------RKP-------------------------RRRRRRSRTFSH 170

  Fly   269 DDSSNKKERKLYNDGYDDDNHDYIIKN-GEKFLDRYEIDSLIGKGSFGQVVKAYDHEE-QCHVAI 331
            ..|.:...|.   ...:||...::|.: |:...:||||.|.:|:|:||:||:..||.. ...||:
  Rat   171 SSSQHSSRRA---KSVEDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVAL 232

  Fly   332 KIIKNKKPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNT 396
            |||||.:.:...|::|:.:||.:|..|.:||...|::...|.:..|:|:.||||..:.:|.|::.
  Rat   233 KIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDN 297

  Fly   397 NFRGVSLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCNP-----------------KR 444
            |:....::..|..|.|||.|:.||...:|.  |.||||||||..|.                 |.
  Rat   298 NYLPYPIHQVRHMAFQLCQAVKFLHDNKLT--HTDLKPENILFVNSDYELTYNLEKKRDERSVKS 360

  Fly   445 SAIKIVDFGSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCN 509
            :|:::|||||:....:.....:.:|.||:|||:|.:.:....|:||:|||:.|.:.|..||...:
  Rat   361 TAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHD 425

  Fly   510 EVDQMNKIVEVLGMPPKYLLDQAHKTRKFF------DKIVADGSYVLKKNQNGRKYKPPGSRKLH 568
            ..:.:..:..:||..|..::.:..|.:.|:      |:..:.|.||.:..:..|:|....:...|
  Rat   426 NREHLAMMERILGPVPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEDHH 490

  Fly   569 DILGVETGGPGGRRLDEPGHSVSDYLKFKDLILRMLDFDPKTRVTPYYALQHNFFKRTADEATNT 633
            .:.                          |||..||:::|..|:|...||||.||.....|..||
  Rat   491 QLF--------------------------DLIENMLEYEPAKRLTLGEALQHPFFACLRTEPPNT 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mnbNP_728107.2 PKc_DYRK1 289..628 CDD:271128 110/363 (30%)
S_TKc 303..623 CDD:214567 105/343 (31%)
Clk2XP_008759408.1 PKc_CLK2 190..519 CDD:271117 108/356 (30%)
S_TKc 203..519 CDD:214567 105/343 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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